| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01245 | | lipopolysaccharide heptosyltransferase II | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.98 | 9 |
| Pseudomonas putida KT2440 | 0.55 | PP_0341 | | ADP-heptose:LPS heptosyltransferase II | 0.46 | PP_1799 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_3671 | | ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_0520 | | Glycosyl transferase, family 9 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_0520 | | Glycosyl transferase, family 9 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas sp. SVBP6 | 0.54 | COO64_RS22830 | waaF | lipopolysaccharide heptosyltransferase II | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_0451 | | lipopolysaccharide heptosyltransferase II | 0.83 | Psest_1818 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_08950 | | ADP-heptose--LPS heptosyltransferase | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas sp. DMC3 | 0.53 | GFF3156 | | ADP-heptose--LPS heptosyltransferase 2 | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_1473 | | ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | — | — |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_00682 | | ADP-heptose--LPS heptosyltransferase 2 | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas segetis P6 | 0.53 | MPMX49_04208 | | ADP-heptose--LPS heptosyltransferase 2 | 0.43 | MPMX49_00388 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_12875 | | ADP-heptose--LPS heptosyltransferase | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_212 | | ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | — | — |
| Pseudomonas sp. RS175 | 0.53 | PFR28_05063 | | ADP-heptose--LPS heptosyltransferase 2 | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS02285 | | lipopolysaccharide heptosyltransferase II | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS02285 | | lipopolysaccharide heptosyltransferase II | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas sp. S08-1 | 0.53 | OH686_09690 | | lipopolysaccharide heptosyltransferase II | 0.40 | OH686_11980 | | GDP-mannose 4,6-dehydratase | — | — |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_28475 | | heptosyltransferase I | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | — | — |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS20775 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Rahnella sp. WP5 | 0.50 | EX31_RS14400 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF391 | | ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_19320 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.50 | MCAODC_06205 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Dickeya dadantii 3937 | 0.50 | DDA3937_RS20445 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_12455 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli BL21 | 0.50 | ECD_03477 | | ADP-heptose:LPS heptosyltransferase II | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | — | — |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_15695 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_13455 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | 0.79 | 4 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3872 | | lipopolysaccharide heptosyltransferase II | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC62 | 0.50 | BNILDI_03935 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_14540 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS20650 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | low | > 55 |
| Escherichia fergusonii Becca | 0.50 | EFB2_00191 | | ADP-heptose--LPS heptosyltransferase 2 | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_00080 | | ADP-heptose--LPS heptosyltransferase 2 | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Escherichia coli BW25113 | 0.50 | b3620 | rfaF | ADP-heptose:LPS heptosyltransferase II (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_07575 | rfaF | ADP-heptose--LPS heptosyltransferase RfaF | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Dickeya dianthicola 67-19 | 0.49 | HGI48_RS00765 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | — | — |
| Dickeya dianthicola ME23 | 0.49 | DZA65_RS00820 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | — | — |
| Erwinia amylovora T8 | 0.49 | OLJFJH_05880 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | — | — |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_00113 | | ADP-heptose--LPS heptosyltransferase 2 | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.48 | PagCFBP13505_RS18660 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | — | — |
| Pantoea sp. MT58 | 0.48 | IAI47_00685 | | ADP-heptose--LPS heptosyltransferase RfaF | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS03165 | | ADP-heptose--LPS heptosyltransferase | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | — | — |
| Dechlorosoma suillum PS | 0.39 | Dsui_3341 | | lipopolysaccharide heptosyltransferase II | 0.71 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | — | — |
| Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS16295 | | ADP-heptose--LPS heptosyltransferase | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS02400 | | lipopolysaccharide heptosyltransferase II | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | — | — |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS21185 | | lipopolysaccharide heptosyltransferase II | 0.47 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_04195 | | heptosyltransferase-2 | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_003434 | | heptosyltransferase-2 | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Xanthobacter sp. DMC5 | 0.32 | GFF367 | | ADP-heptose--LPS heptosyltransferase 2 | 0.10 | GFF1115 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Rhodopseudomonas palustris CGA009 | 0.27 | TX73_020655 | | lipopolysaccharide heptosyltransferase II | 0.45 | TX73_020470 | | GDP-mannose 4,6-dehydratase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.13 | CA264_20400 | | heptosyltransferase | 0.66 | CA264_05200 | | GDP-mannose 4,6-dehydratase | 0.38 | 47 |
| Magnetospirillum magneticum AMB-1 | 0.12 | AMB_RS02720 | | glycosyltransferase family 9 protein | 0.63 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.11 | DVU1055 | | heptosyltransferase family protein (TIGR) | 0.69 | DVU0448 | gmd | GDP-mannose 4,6-dehydratase (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.11 | DvMF_3136 | | lipopolysaccharide heptosyltransferase II (RefSeq) | 0.67 | DvMF_2694 | | GDP-mannose 4,6-dehydratase (RefSeq) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.10 | ABZR88_RS13940 | | glycosyltransferase family 9 protein | 0.67 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | — | — |
| Rhodospirillum rubrum S1H | 0.10 | Rru_A2230 | | Glycosyl transferase, family 9 (NCBI) | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.10 | BT3362 | | heptosyltransferase (NCBI ptt file) | 0.60 | BT1224 | | GDP-mannose 4,6-dehydratase (NCBI ptt file) | — | — |
| Synechococcus elongatus PCC 7942 | 0.09 | Synpcc7942_0682 | | hypothetical protein | 0.71 | Synpcc7942_1342 | gmd | GDP-mannose 4,6-dehydratase | — | — |
| Azospirillum sp. SherDot2 | 0.09 | MPMX19_04967 | | ADP-heptose--LPS heptosyltransferase 2 | 0.63 | MPMX19_06644 | | GDP-mannose 4,6-dehydratase | — | — |
| Azospirillum brasilense Sp245 | 0.08 | AZOBR_RS06275 | | heptosyltransferase | 0.44 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | — | — |
Not shown: 13 genomes with orthologs for CSW01_01245 only; 26 genomes with orthologs for CSW01_01280 only