Conservation of cofitness between CSW01_09970 and CSW01_01275 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09970 peptide-methionine (R)-S-oxide reductase 1.0 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.85 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.66 GFF3880 Phosphomannomutase (EC 5.4.2.8) low > 78
Enterobacter sp. TBS_079 0.54 MPMX20_01845 Peptide methionine sulfoxide reductase MsrB 0.68 MPMX20_03030 Phosphomannomutase/phosphoglucomutase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1772 methionine-R-sulfoxide reductase 0.68 EX28DRAFT_0507 Phosphomannomutase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB 0.69 OHPLBJKB_01667 Phosphomannomutase/phosphoglucomutase low > 74
Escherichia coli ECRC99 0.52 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB 0.68 KEDOAH_03780 cpsG colanic acid biosynthesis phosphomannomutase CpsG — —
Escherichia coli ECRC98 0.52 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB 0.68 JDDGAC_28480 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 87
Escherichia coli BL21 0.52 ECD_01747 methionine sulfoxide reductase B 0.68 ECD_01954 phosphomannomutase low > 61
Escherichia coli ECRC102 0.52 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB 0.68 NIAGMN_22315 cpsG colanic acid biosynthesis phosphomannomutase CpsG — —
Escherichia coli ECRC101 0.52 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB 0.68 MCAODC_20570 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 87
Escherichia coli Nissle 1917 0.52 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB 0.68 ECOLIN_RS12070 colanic acid biosynthesis phosphomannomutase CpsG — —
Escherichia coli ECOR27 0.52 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB 0.68 NOLOHH_15700 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 76
Escherichia coli ECOR38 0.52 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB 0.68 HEPCGN_03070 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 88
Escherichia fergusonii Becca 0.52 EFB2_02216 Peptide methionine sulfoxide reductase MsrB 0.68 EFB2_01806 Phosphomannomutase/phosphoglucomutase low > 86
Escherichia coli ECRC100 0.52 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB 0.68 OKFHMN_24370 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 79
Escherichia coli BW25113 0.52 b1778 yeaA methionine sulfoxide reductase B (NCBI) 0.68 b2048 cpsG phosphomannomutase (NCBI) low > 76
Escherichia coli ECRC62 0.52 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB 0.68 BNILDI_14615 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 75
Acinetobacter radioresistens SK82 0.52 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.62 MPMX26_00067 Phosphomannomutase/phosphoglucomutase low > 36
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.23 Pf1N1B4_2122 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.22 Pf6N2E2_4374 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 103
Pseudomonas sp. DMC3 0.50 GFF4595 Peptide methionine sulfoxide reductase MsrB 0.22 GFF406 Phosphomannomutase/phosphoglucomutase low > 89
Pseudomonas fluorescens SBW25 0.50 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.23 PFLU_RS29465 phosphomannomutase/phosphoglucomutase low > 109
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.23 PfGW456L13_794 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_03085 peptide methionine sulfoxide reductase 0.22 AO356_12530 phosphoglucomutase low > 104
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_19155 peptide methionine sulfoxide reductase 0.23 AO353_09235 phosphoglucomutase 0.27 89
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.23 PFLU_RS29465 phosphomannomutase/phosphoglucomutase low > 109
Pseudomonas sp. SVBP6 0.49 COO64_RS05975 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.52 COO64_RS06650 phosphomannomutase low > 93
Pseudomonas simiae WCS417 0.49 PS417_08565 peptide methionine sulfoxide reductase 0.23 PS417_27785 phosphoglucomutase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3614 Protein of unknown function DUF25 0.24 Psyr_0219 phosphomannomutase low > 86
Pseudomonas sp. RS175 0.49 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.23 PFR28_04415 Phosphomannomutase/phosphoglucomutase low > 88
Pseudomonas sp. BP01 0.49 JOY50_RS16980 msrB peptide-methionine (R)-S-oxide reductase MsrB 0.54 JOY50_RS15915 phosphomannomutase low > 84
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3614 Protein of unknown function DUF25 0.24 Psyr_0219 phosphomannomutase low > 86
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_01845 Peptide methionine sulfoxide reductase MsrB 0.23 GEMAOFIL_00025 Phosphomannomutase/phosphoglucomutase low > 96
Sinorhizobium meliloti 1021 0.49 SMc00117 hypothetical protein 0.14 SM_b21081 phosphoglucomutase phosphomannomutase low > 103
Pseudomonas putida KT2440 0.48 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.54 PP_1777 phosphomannomutase low > 96
Acinetobacter baumannii LAC-4 0.47 RR41_RS11540 peptide-methionine (R)-S-oxide reductase MsrB 0.65 RR41_RS18520 phosphomannomutase/phosphoglucomutase — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase 0.22 RPSI07_RS20565 phosphomannomutase/phosphoglucomutase — —
Ralstonia solanacearum UW163 0.47 UW163_RS14495 peptide-methionine (R)-S-oxide reductase 0.22 UW163_RS00870 phosphomannomutase/phosphoglucomutase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS08825 peptide-methionine (R)-S-oxide reductase 0.22 RS_RS03475 phosphomannomutase/phosphoglucomutase — —
Sphingobium sp. HT1-2 0.47 GFF4143 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.21 GFF4179 Phosphomannomutase (EC 5.4.2.8) low > 95
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase 0.22 RALBFv3_RS12695 phosphomannomutase/phosphoglucomutase — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB 0.19 ABCV34_RS09280 phosphomannomutase/phosphoglucomutase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.23 ABIE53_001189 phosphomannomutase/phosphoglucomutase — —
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS09545 peptide methionine sulfoxide reductase 0.24 BPHYT_RS04470 phosphoglucomutase — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.24 H281DRAFT_00078 phosphomannomutase — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS11165 methionine sulfoxide reductase B 0.22 RR42_RS15690 phosphoglucomutase — —
Magnetospirillum magneticum AMB-1 0.45 AMB_RS20830 peptide-methionine (R)-S-oxide reductase 0.20 AMB_RS02965 phosphomannomutase/phosphoglucomutase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS11215 methionine sulfoxide reductase B 0.24 HSERO_RS02355 phosphoglucomutase low > 78
Variovorax sp. SCN45 0.44 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.24 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) low > 127
Rhodopseudomonas palustris CGA009 0.44 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB 0.16 TX73_017170 phosphomannomutase/phosphoglucomutase low > 86
Variovorax sp. OAS795 0.43 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB 0.24 ABID97_RS21385 phosphomannomutase/phosphoglucomutase low > 91
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.25 Ac3H11_2215 Phosphomannomutase (EC 5.4.2.8) — —
Caulobacter crescentus NA1000 0.42 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase low > 66
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_02265 peptide methionine sulfoxide reductase msrB 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.4624.1 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.54 Xcc-8004.4480.1 Phosphomannomutase (EC 5.4.2.8) low > 74
Mycobacterium tuberculosis H37Rv 0.38 Rv2674 Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase) 0.28 Rv3257c Probable phosphomannomutase PmmA (PMM) (phosphomannose mutase) — —
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS15535 methionine sulfoxide reductase B 0.13 CA265_RS13185 phosphoglucosamine mutase — —

Not shown: 9 genomes with orthologs for CSW01_09970 only; 36 genomes with orthologs for CSW01_01275 only