Conservation of cofitness between CSW01_00280 and CSW01_00215 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00280 shikimate dehydrogenase 1.0 CSW01_00215 potassium uptake protein TrkH 0.81 10
Pseudomonas sp. S08-1 0.57 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.50 OH686_20750 Trk potassium uptake system protein TrkH — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10670 shikimate dehydrogenase 0.50 AO353_18480 potassium transporter TrkH low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0025 shikimate dehydrogenase 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0025 shikimate dehydrogenase 0.47 Psyr_3593 K+ transporter Trk low > 86
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.49 PfGW456L13_4413 Potassium uptake protein TrkH low > 87
Pseudomonas sp. DMC3 0.55 GFF600 Shikimate dehydrogenase (NADP(+)) 0.51 GFF2771 Trk system potassium uptake protein TrkI — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.48 Pf1N1B4_3543 Potassium uptake protein TrkH low > 87
Pseudomonas sp. RS175 0.55 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.49 PFR28_00798 Trk system potassium uptake protein TrkI — —
Pseudomonas simiae WCS417 0.54 PS417_00125 shikimate dehydrogenase 0.49 PS417_22205 potassium transporter TrkH — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.48 Pf6N2E2_2634 Potassium uptake protein TrkH — —
Pseudomonas fluorescens SBW25 0.54 PFLU_RS00120 shikimate dehydrogenase 0.47 PFLU_RS23830 TrkH family potassium uptake protein — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS00120 shikimate dehydrogenase 0.47 PFLU_RS23830 TrkH family potassium uptake protein — —
Pseudomonas putida KT2440 0.53 PP_0074 shikimate 5-dehydrogenase 0.50 PP_3953 potassium transporter — —
Pseudomonas sp. SVBP6 0.53 COO64_RS02250 aroE shikimate dehydrogenase 0.50 COO64_RS21795 TrkH family potassium uptake protein — —
Pseudomonas stutzeri RCH2 0.53 Psest_0029 shikimate 5-dehydrogenase 0.48 Psest_1879 Trk-type K+ transport systems, membrane components — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_11315 shikimate dehydrogenase 0.48 AO356_03995 potassium transporter TrkH low > 104
Pseudomonas sp. BP01 0.53 JOY50_RS08210 aroE shikimate dehydrogenase 0.49 JOY50_RS01110 TrkH family potassium uptake protein — —
Shewanella loihica PV-4 0.53 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.57 Shew_3740 TrkH family potassium uptake protein (RefSeq) low > 60
Pseudomonas aeruginosa PA14 0.52 IKLFDK_25435 shikimate dehydrogenase 0.49 IKLFDK_09050 potassium transporter TrkH — —
Shewanella sp. ANA-3 0.51 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.56 Shewana3_0031 TrkH family potassium uptake protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) 0.56 SO0028 trkH-2 potassium uptake protein TrkH (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.50 HP15_3750 shikimate dehydrogenase 0.43 HP15_1705 potassium uptake protein, TrkH family — —
Shewanella amazonensis SB2B 0.49 Sama_0052 shikimate dehydrogenase (RefSeq) 0.59 Sama_0039 potassium uptake protein TrkH (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.24 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) 0.43 Dshi_2406 cation transporter (RefSeq) — —
Sinorhizobium meliloti 1021 0.23 SMc02791 shikimate 5-dehydrogenase 0.30 SMa1691 Cation transport ATPase — —
Phaeobacter inhibens DSM 17395 0.23 PGA1_c35150 shikimate dehydrogenase AroE 0.40 PGA1_c23520 trk system potassium uptake protein — —
Agrobacterium fabrum C58 0.22 Atu0003 shikimate 5-dehydrogenase 0.29 Atu1204 potassium uptake protein — —
Xanthobacter sp. DMC5 0.22 GFF3737 Shikimate dehydrogenase (NADP(+)) 0.35 GFF4632 Trk system potassium uptake protein TrkI — —
Azospirillum brasilense Sp245 0.21 AZOBR_RS01765 shikimate 5-dehydrogenase 0.38 AZOBR_RS10695 potassium transporter TrkH — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS00280 shikimate dehydrogenase 0.13 MMJJ_RS07000 TrkH family potassium uptake protein — —
Methanococcus maripaludis S2 0.20 MMP_RS04855 shikimate dehydrogenase 0.12 MMP_RS07360 TrkH family potassium uptake protein — —
Rhodospirillum rubrum S1H 0.20 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.37 Rru_A1134 Cation transporter (NCBI) — —
Magnetospirillum magneticum AMB-1 0.15 AMB_RS23010 shikimate dehydrogenase 0.38 AMB_RS20770 TrkH family potassium uptake protein — —
Parabacteroides merdae CL09T00C40 0.13 HMPREF1078_RS14200 shikimate dehydrogenase 0.29 HMPREF1078_RS13010 TrkH family potassium uptake protein low > 61
Bacteroides thetaiotaomicron VPI-5482 0.12 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.28 BT4097 Trk system K+ uptake protein trkH (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.12 BACOVA_05065 putative shikimate dehydrogenase 0.29 BACOVA_04887 potassium uptake protein, TrkH family — —
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS06320 shikimate dehydrogenase 0.29 HMPREF1181_RS08990 TrkH family potassium uptake protein low > 56
Phocaeicola dorei CL03T12C01 0.11 ABI39_RS12665 shikimate dehydrogenase 0.28 ABI39_RS08550 TrkH family potassium uptake protein low > 72
Phocaeicola vulgatus CL09T03C04 0.10 HMPREF1058_RS16750 shikimate dehydrogenase 0.29 HMPREF1058_RS13345 TrkH family potassium uptake protein low > 67

Not shown: 71 genomes with orthologs for CSW01_00280 only; 0 genomes with orthologs for CSW01_00215 only