Conservation of cofitness between CSW01_01010 and CSW01_00180 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01010 oligopeptidase A 1.0 CSW01_00180 cytochrome c oxidase accessory protein CcoG 0.58 18
Shewanella loihica PV-4 0.68 Shew_3657 oligopeptidase A (RefSeq) 0.58 Shew_3812 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.67 Sama_3546 oligopeptidase A (RefSeq) 0.58 Sama_3633 iron-sulfur cluster-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_4051 oligopeptidase A (RefSeq) 0.61 Shewana3_4121 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.62 SO4737 iron-sulfur cluster-binding protein (NCBI ptt file) 0.42 53
Alteromonas macleodii MIT1002 0.66 MIT1002_03633 Oligopeptidase A 0.55 MIT1002_00719 cytochrome c oxidase accessory protein CcoG low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.45 B158DRAFT_1970 cytochrome c oxidase accessory protein FixG low > 40
Pseudomonas aeruginosa PA14 0.58 IKLFDK_25215 oligopeptidase A 0.50 IKLFDK_07410 cytochrome c oxidase accessory protein CcoG 0.64 6
Marinobacter adhaerens HP15 0.58 HP15_3759 oligopeptidase A-like protein 0.48 HP15_2111 iron-sulfur cluster-binding protein low > 73
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.50 Psest_2531 cytochrome c oxidase accessory protein FixG low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.48 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.48 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein low > 86
Pseudomonas segetis P6 0.57 MPMX49_00359 Oligopeptidase A 0.50 MPMX49_02310 hypothetical protein 0.69 7
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.50 PfGW456L13_4065 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation low > 87
Pseudomonas sp. SVBP6 0.56 COO64_RS02335 prlC oligopeptidase A 0.50 COO64_RS18670 ccoG cytochrome c oxidase accessory protein CcoG 0.38 19
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.51 OH686_02210 cytochrome c oxidase accessory protein CcoG low > 80
Pseudomonas simiae WCS417 0.56 PS417_00245 oligopeptidase A 0.50 PS417_20750 (Fe-S)-binding protein — —
Pseudomonas putida KT2440 0.56 PP_0096 oligopeptidase A 0.49 PP_4259 Iron-sulfur cluster-binding protein low > 96
Pseudomonas sp. DMC3 0.56 GFF663 Oligopeptidase A 0.51 GFF718 hypothetical protein low > 89
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00240 oligopeptidase A 0.50 PFLU_RS22360 cytochrome c oxidase accessory protein CcoG low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00240 oligopeptidase A 0.50 PFLU_RS22360 cytochrome c oxidase accessory protein CcoG low > 109
Pseudomonas sp. RS175 0.56 PFR28_04699 Oligopeptidase A 0.50 PFR28_01085 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.48 Pf1N1B4_4673 4Fe-4S ferredoxin, iron-sulfur binding low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.50 AO353_00630 (Fe-S)-binding protein low > 101
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_00254 Oligopeptidase A 0.50 GEMAOFIL_04295 hypothetical protein low > 93
Pseudomonas sp. BP01 0.56 JOY50_RS21245 prlC oligopeptidase A 0.49 JOY50_RS00095 ccoG cytochrome c oxidase accessory protein CcoG low > 84
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.50 Pf6N2E2_2316 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11120 oligopeptidase A 0.50 AO356_02455 (Fe-S)-binding protein low > 104
Methylophilus sp. DMC18 0.52 GFF2262 Oligopeptidase A 0.39 GFF1761 hypothetical protein low > 43
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07290 oligopeptidase A 0.39 HSERO_RS16035 cytochrome C oxidase low > 78
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.39 Dsui_0928 cytochrome c oxidase accessory protein FixG low > 51
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.38 RR42_RS12890 cytochrome C oxidase low > 128
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.36 RS_RS06415 cytochrome c oxidase accessory protein CcoG low > 80
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.38 ABZR87_RS11165 cytochrome c oxidase accessory protein CcoG low > 80
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.37 RALBFv3_RS15635 cytochrome c oxidase accessory protein CcoG low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.37 UW163_RS13095 cytochrome c oxidase accessory protein CcoG — —
Ralstonia solanacearum PSI07 0.47 RPSI07_RS15795 oligopeptidase A 0.36 RPSI07_RS17720 cytochrome c oxidase accessory protein CcoG low > 81
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.39 ABID97_RS16205 cytochrome c oxidase accessory protein CcoG low > 91
Variovorax sp. SCN45 0.44 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.40 GFF6960 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.41 Ac3H11_972 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.40 GFF4139 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation low > 90
Castellaniella sp019104865 MT123 0.42 ABCV34_RS04180 M3 family metallopeptidase 0.39 ABCV34_RS06850 cytochrome c oxidase accessory protein CcoG low > 48
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_2572 Zn-dependent oligopeptidases 0.23 Echvi_2888 cytochrome c oxidase accessory protein FixG low > 79
Sinorhizobium meliloti 1021 0.27 SMc04403 peptidyl-dipeptidase A protein 0.27 SMa1211 FixG iron sulfur membrane protein 0.22 36
Agrobacterium fabrum C58 0.27 Atu2664 peptidyl-dipeptidase 0.29 Atu1530 nitrogen fixation protein FixG low > 89
Rhizobium sp. OAE497 0.27 ABIE40_RS18135 M3 family metallopeptidase 0.28 ABIE40_RS26145 cytochrome c oxidase accessory protein CcoG low > 107
Rhodopseudomonas palustris CGA009 0.26 TX73_004495 M3 family metallopeptidase 0.26 TX73_005210 cytochrome c oxidase accessory protein CcoG low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.24 ABZR88_RS16390 peptidyl-dipeptidase Dcp 0.24 ABZR88_RS05590 cytochrome c oxidase accessory protein CcoG low > 71
Bosea sp. OAE506 0.24 ABIE41_RS12985 M3 family metallopeptidase 0.28 ABIE41_RS10545 cytochrome c oxidase accessory protein CcoG low > 77
Dinoroseobacter shibae DFL-12 0.22 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.27 Dshi_0665 Cytochrome c oxidase cbb3 type accessory protein FixG (RefSeq) low > 64
Caulobacter crescentus NA1000 0.22 CCNA_03816 peptidyl-dipeptidase DCP 0.26 CCNA_01471 polyferredoxin protein fixG low > 66
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_03816 peptidyl-dipeptidase DCP 0.26 CCNA_01471 polyferredoxin protein fixG low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_01885 peptidase M3 0.24 CA264_05765 cytochrome c oxidase accessory protein CcoG low > 74
Lysobacter sp. OAE881 0.21 ABIE51_RS09155 M3 family metallopeptidase 0.38 ABIE51_RS03830 4Fe-4S dicluster domain-containing protein low > 62

Not shown: 53 genomes with orthologs for CSW01_01010 only; 6 genomes with orthologs for CSW01_00180 only