Conservation of cofitness between CSW01_05575 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05575 phosphate acetyltransferase 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.68 11
Rahnella sp. WP5 0.78 EX31_RS19485 phosphate acetyltransferase 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.57 38
Pectobacterium carotovorum WPP14 0.78 HER17_RS07080 phosphate acetyltransferase 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Dickeya dadantii 3937 0.78 DDA3937_RS14385 phosphate acetyltransferase 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Serratia liquefaciens MT49 0.78 IAI46_17755 phosphate acetyltransferase 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 87
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS00295 phosphate acetyltransferase 0.74 PagCFBP13505_RS19345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Erwinia amylovora T8 0.77 OLJFJH_11360 phosphate acetyltransferase 0.74 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Dickeya dianthicola 67-19 0.77 HGI48_RS14355 phosphate acetyltransferase 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS15285 phosphate acetyltransferase 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Erwinia tracheiphila SCR3 0.77 LU632_RS07920 pta phosphate acetyltransferase 0.73 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_17985 Phosphate acetyltransferase 0.73 IJEDHG_09755 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pantoea sp. MT58 0.76 IAI47_06320 phosphate acetyltransferase 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS20240 phosphate acetyltransferase 0.77 BWI76_RS00050 tRNA modification GTPase — —
Enterobacter sp. TBS_079 0.76 MPMX20_03227 Phosphate acetyltransferase 0.75 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01408 Phosphate acetyltransferase 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia coli BW25113 0.76 b2297 pta phosphate acetyltransferase (NCBI) 0.76 b3706 trmE tRNA modification GTPase (NCBI) 0.31 75
Escherichia coli BL21 0.76 ECD_02222 phosphate acetyltransferase 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase — —
Escherichia fergusonii Becca 0.76 EFB2_01561 Phosphate acetyltransferase 0.76 EFB2_04925 tRNA modification GTPase MnmE 0.73 8
Escherichia coli ECRC100 0.76 OKFHMN_22790 pta phosphate acetyltransferase 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia coli ECRC101 0.76 MCAODC_13830 pta phosphate acetyltransferase 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli Nissle 1917 0.76 ECOLIN_RS13335 phosphate acetyltransferase 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Escherichia coli ECRC102 0.76 NIAGMN_20560 pta phosphate acetyltransferase 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli ECRC98 0.76 JDDGAC_26755 pta phosphate acetyltransferase 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0312 phosphate acetyltransferase 0.75 EX28DRAFT_3993 tRNA modification GTPase TrmE — —
Escherichia coli ECOR38 0.76 HEPCGN_21995 pta phosphate acetyltransferase 0.76 HEPCGN_13680 tRNA modification GTPase MnmE low > 88
Escherichia coli ECOR27 0.76 NOLOHH_14410 pta phosphate acetyltransferase 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Escherichia coli ECRC62 0.76 BNILDI_13330 pta phosphate acetyltransferase 0.76 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli ECRC99 0.76 KEDOAH_05405 pta phosphate acetyltransferase 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1901 Phosphate acetyltransferase (EC 2.3.1.8) 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Klebsiella pneumoniae MKP103 0.76 KDGMDA_27115 phosphate acetyltransferase 0.75 KDGMDA_08700 tRNA modification GTPase MnmE low > 95
Shewanella loihica PV-4 0.69 Shew_2394 phosphate acetyltransferase (RefSeq) 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella amazonensis SB2B 0.68 Sama_1494 phosphate acetyltransferase (RefSeq) 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella sp. ANA-3 0.68 Shewana3_1551 phosphate acetyltransferase (RefSeq) 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.68 SO2916 pta phosphate acetyltransferase (NCBI ptt file) 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.60 MIT1002_01474 Phosphate acetyltransferase 0.67 MIT1002_04128 tRNA modification GTPase MnmE — —
Pseudomonas segetis P6 0.53 MPMX49_03685 Phosphate acetyltransferase 0.64 MPMX49_00248 tRNA modification GTPase MnmE — —
Pseudomonas sp. S08-1 0.52 OH686_06270 phosphate acetyltransferase 0.63 OH686_12655 tRNA modification GTPase TrmE — —
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS08320 pta;go_function=acetyltransferase phosphate acetyltransferase 0.66 DY961_RS26185 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS44505 pta;go_function=acetyltransferase phosphate acetyltransferase 0.66 DQ20_RS58595 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_03670 phosphate acetyltransferase 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 98
Marinobacter adhaerens HP15 0.51 HP15_1498 phosphate acetyltransferase 0.68 HP15_3698 tRNA modification GTPase TrmE — —
Pseudomonas simiae WCS417 0.50 PS417_03730 phosphate acetyltransferase 0.64 PS417_28540 tRNA modification GTPase MnmE — —
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_00952 Phosphate acetyltransferase 0.64 GEMAOFIL_00178 tRNA modification GTPase MnmE — —
Pseudomonas orientalis W4I3 0.50 QF045_RS06715 phosphate acetyltransferase 0.64 QF045_RS02925 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 93
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_05065 phosphate acetyltransferase 0.64 AO353_10455 tRNA modification GTPase MnmE low > 101
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS03780 phosphate acetyltransferase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS03780 phosphate acetyltransferase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 109
Pseudomonas sp. RS175 0.50 PFR28_00196 Phosphate acetyltransferase 0.64 PFR28_04588 tRNA modification GTPase MnmE — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1007 phosphotransacetylase 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1007 phosphotransacetylase 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5260 Phosphate acetyltransferase (EC 2.3.1.8) 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_16680 phosphate acetyltransferase 0.64 AO356_11660 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4990 Phosphate acetyltransferase (EC 2.3.1.8) 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas sp. DMC3 0.49 GFF1851 Phosphate acetyltransferase 0.64 GFF573 tRNA modification GTPase MnmE — —
Pseudomonas sp. SVBP6 0.49 COO64_RS03470 pta phosphate acetyltransferase 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas stutzeri RCH2 0.49 Psest_3214 phosphate acetyltransferase 0.64 Psest_4373 tRNA modification GTPase TrmE — —
Pseudomonas sp. BP01 0.48 JOY50_RS19385 pta phosphate acetyltransferase 0.65 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas putida KT2440 0.47 PP_0774 Phosphate acetyltransferase 0.65 PP_0005 GTPase — —
Acinetobacter baumannii LAC-4 0.47 RR41_RS16540 phosphate acetyltransferase 0.50 RR41_RS19010 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Acinetobacter radioresistens SK82 0.46 MPMX26_00414 Phosphate acetyltransferase 0.48 MPMX26_03070 tRNA modification GTPase MnmE low > 36
Rhodospirillum rubrum S1H 0.46 Rru_A2997 Phosphate acetyltransferase (NCBI) 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_1864 phosphate acetyltransferase (RefSeq) 0.27 DvMF_0886 trmE tRNA modification GTPase TrmE (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU3029 pta phosphate acetyltransferase (TIGR) 0.22 DVU1079 trmE tRNA modification GTPase TrmE (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS10075 phosphate acetyltransferase 0.28 CA265_RS10450 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Synechocystis sp000284455 PCC 6803 0.29 SGL_RS07720 phosphate acetyltransferase 0.26 SGL_RS08695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Cellulophaga baltica 18 0.27 M666_RS11875 phosphate acetyltransferase 0.30 M666_RS12855 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 67

Not shown: 1 genomes with orthologs for CSW01_05575 only; 54 genomes with orthologs for CSW01_00015 only