Conservation of cofitness between CCNA_01152 and CCNA_03786 in Caulobacter crescentus NA1000

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 1.0 CCNA_01152 external DNA uptake/catabolism protein 1.0 CCNA_03786 heme chaperone heme-lyase 0.36 20
Caulobacter crescentus NA1000 Δfur 1.00 CCNA_01152 external DNA uptake/catabolism protein 1.00 CCNA_03786 heme chaperone heme-lyase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS02525 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.50 A4249_RS12785 heme ABC transporter permease — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.1778.1 Protein involved in catabolism of external DNA 0.37 Xcc-8004.2345.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS02005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.36 LRK54_RS16080 heme ABC transporter permease — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS01780 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.36 LRK55_RS15830 heme ABC transporter permease — —
Rhodospirillum rubrum S1H 0.30 Rru_A1938 Protein of unknown function DUF519 (NCBI) 0.41 Rru_A0038 Cytochrome c-type biogenesis protein CcmC (NCBI) — —
Pantoea sp. MT58 0.29 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 IAI47_06075 heme ABC transporter permease low > 76
Azospirillum sp. SherDot2 0.29 MPMX19_01202 Ribosomal RNA large subunit methyltransferase J 0.46 MPMX19_02530 Heme exporter protein C — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3679 Protein involved in catabolism of external DNA 0.39 Pf6N2E2_2558 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas putida KT2440 0.28 PP_4945 23S rRNA m(6)A2030 methyltransferase 0.40 PP_4325 protoheme IX reservoir complex subunit — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_219 Protein involved in catabolism of external DNA 0.40 PfGW456L13_4314 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Magnetospirillum magneticum AMB-1 0.28 AMB_RS03020 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.42 AMB_RS21235 heme transporter HemC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF515 Protein involved in catabolism of external DNA 0.38 GFF4880 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1481 Protein involved in catabolism of external DNA 0.40 Pf1N1B4_3641 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_4772 Protein of unknown function DUF519 0.41 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Lysobacter sp. OAE881 0.28 ABIE51_RS14285 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.33 ABIE51_RS08715 heme ABC transporter permease CcmC low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_4772 Protein of unknown function DUF519 0.41 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08990 lactate dehydrogenase 0.39 AO356_03650 heme ABC transporter permease — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS21900 lactate dehydrogenase 0.46 AZOBR_RS00725 heme ABC transporter (exporter) permease component — —
Pseudomonas sp. RS175 0.27 PFR28_05056 Ribosomal RNA large subunit methyltransferase J 0.40 PFR28_00867 Heme exporter protein C — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 PFLU_RS08655 heme ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_12840 lactate dehydrogenase 0.40 AO353_18860 heme ABC transporter permease — —
Pseudomonas simiae WCS417 0.27 PS417_02200 lactate dehydrogenase 0.41 PS417_08700 heme ABC transporter permease — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 PFLU_RS08655 heme ABC transporter permease low > 109
Pseudomonas sp. S08-1 0.27 OH686_09780 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.36 OH686_02650 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pectobacterium carotovorum WPP14 0.27 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 HER17_RS09040 heme ABC transporter permease low > 75
Pseudomonas stutzeri RCH2 0.27 Psest_0408 Protein involved in catabolism of external DNA 0.39 Psest_1756 heme exporter protein CcmC — —
Shewanella loihica PV-4 0.27 Shew_3648 hypothetical protein (RefSeq) 0.35 Shew_0188 heme exporter protein CcmC (RefSeq) — —
Agrobacterium fabrum C58 0.27 Atu1135 hypothetical protein 0.47 Atu2688 ABC transporter, membrane spanning protein (heme) — —
Rahnella sp. WP5 0.27 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 EX31_RS19760 heme ABC transporter permease low > 89
Rhizobium sp. OAE497 0.27 ABIE40_RS06520 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.45 ABIE40_RS18290 heme ABC transporter permease low > 107
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 CSW01_10280 heme exporter protein C low > 62
Sinorhizobium meliloti 1021 0.26 SMc00608 hypothetical protein 0.48 SMc03849 heme exporter C (cytochrome C-type biogenesis protein) transmembrane low > 103
Serratia liquefaciens MT49 0.26 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 IAI46_18100 heme ABC transporter permease low > 86
Rhodopseudomonas palustris CGA009 0.25 TX73_006025 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.44 TX73_001060 heme ABC transporter permease — —
Shewanella amazonensis SB2B 0.25 Sama_3563 hypothetical protein (RefSeq) 0.38 Sama_0243 heme exporter protein CcmC (RefSeq) low > 62
Shewanella sp. ANA-3 0.24 Shewana3_4038 hypothetical protein (RefSeq) 0.39 Shewana3_0229 heme exporter protein CcmC (RefSeq) — —
Shewanella oneidensis MR-1 0.24 SO4659 conserved hypothetical protein (NCBI ptt file) 0.39 SO0261 ccmC heme exporter protein CcmC (NCBI ptt file) low > 76
Phaeobacter inhibens DSM 17395 0.23 PGA1_c26480 Protein involved in catabolism of external DNA 0.33 PGA1_c18870 heme exporter protein C — —
Marinobacter adhaerens HP15 0.20 HP15_2563 protein containing DUF519 0.34 HP15_2284 heme exporter protein CcmC — —

Not shown: 36 genomes with orthologs for CCNA_01152 only; 7 genomes with orthologs for CCNA_03786 only