| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS04315 | | Na+/H+ antiporter NhaA | 1.0 | BWI76_RS18335 | | DNA-binding response regulator | 0.21 | 17 |
| Escherichia fergusonii Becca | 0.83 | EFB2_04024 | | Na(+)/H(+) antiporter NhaA | 0.95 | EFB2_02032 | | Response regulator UvrY | low | > 86 |
| Escherichia coli Nissle 1917 | 0.83 | ECOLIN_RS00105 | | Na+/H+ antiporter NhaA | 0.95 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.81 | GFF1119 | | Na+/H+ antiporter NhaA type | 0.94 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_03642 | | Na(+)/H(+) antiporter NhaA | 0.95 | OHPLBJKB_01815 | | Response regulator UvrY | low | > 73 |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_17125 | nhaA | Na+/H+ antiporter NhaA | 0.95 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.79 | MCAODC_01545 | nhaA | Na+/H+ antiporter NhaA | 0.95 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_08880 | nhaA | Na+/H+ antiporter NhaA | 0.95 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_14625 | nhaA | Na+/H+ antiporter NhaA | 0.95 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | low | > 86 |
| Escherichia coli ECRC62 | 0.79 | BNILDI_08245 | nhaA | Na+/H+ antiporter NhaA | 0.94 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_11030 | nhaA | Na+/H+ antiporter NhaA | 0.95 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | 0.80 | 14 |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_03360 | nhaA | Na+/H+ antiporter NhaA | 0.94 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Escherichia coli BW25113 | 0.79 | b0019 | nhaA | pH-dependent sodium/proton antiporter (NCBI) | 0.95 | b1914 | uvrY | response regulator (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_09015 | nhaA | Na+/H+ antiporter NhaA | 0.95 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Enterobacter asburiae PDN3 | 0.77 | EX28DRAFT_3628 | | Na+/H+ antiporter NhaA | 0.95 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.76 | MPMX20_00722 | | Na(+)/H(+) antiporter NhaA | 0.95 | MPMX20_02839 | | Response regulator UvrY | low | > 85 |
| Pantoea sp. MT58 | 0.66 | IAI47_16165 | | Na+/H+ antiporter NhaA | 0.86 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Rahnella sp. WP5 | 0.61 | EX31_RS03890 | | Na+/H+ antiporter NhaA | 0.87 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 89 |
| Serratia liquefaciens MT49 | 0.61 | IAI46_03085 | | Na+/H+ antiporter NhaA | 0.86 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | 0.77 | 14 |
| Erwinia tracheiphila SCR3 | 0.59 | LU632_RS02665 | nhaA | Na+/H+ antiporter NhaA | 0.86 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Shewanella oneidensis MR-1 | 0.58 | SO1336 | nhaA | Na+/H+ antiporter (NCBI ptt file) | 0.69 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_3038 | | Na+/H+ antiporter NhaA (RefSeq) | 0.70 | Shewana3_1608 | | response regulator (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.56 | Sama_0868 | | Na+/H+ antiporter (RefSeq) | 0.65 | Sama_1607 | | response regulator (RefSeq) | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS02850 | | Na+/H+ antiporter NhaA | 0.82 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Shewanella loihica PV-4 | 0.55 | Shew_1042 | | Na+/H+ antiporter NhaA (RefSeq) | 0.70 | Shew_1824 | | response regulator (RefSeq) | — | — |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS18360 | | Na+/H+ antiporter NhaA | 0.81 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS18295 | | Na+/H+ antiporter NhaA | 0.81 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_08180 | | Na+/H+ antiporter NhaA | 0.77 | CSW01_06135 | | two-component system response regulator UvrY | — | — |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS19435 | | Na+/H+ antiporter NhaA | 0.81 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_05390 | | sodium:proton antiporter | 0.50 | AO356_00355 | | chemotaxis protein CheY | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_2937 | | Na+/H+ antiporter NhaA type | 0.50 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_4617 | | Na+/H+ antiporter NhaA type | 0.49 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | — | — |
| Pseudomonas sp. RS175 | 0.50 | PFR28_00526 | | Na(+)/H(+) antiporter NhaA | 0.56 | PFR28_01410 | | Response regulator GacA | — | — |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS06575 | | Na+/H+ antiporter NhaA | 0.55 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS06575 | | Na+/H+ antiporter NhaA | 0.55 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Herbaspirillum seropedicae SmR1 | 0.49 | HSERO_RS11465 | | sodium:proton antiporter | 0.35 | HSERO_RS13890 | | LuxR family transcriptional regulator | low | > 78 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_06545 | | pH-dependent sodium/proton antiporter | 0.55 | PS417_10720 | | chemotaxis protein CheY | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_17055 | | sodium:proton antiporter | 0.50 | AO353_21830 | | chemotaxis protein CheY | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_1132 | | Na(+)/H(+) antiporter NhaA 1 | 0.56 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3202 | | Na+/H+ antiporter NhaA type | 0.49 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS19280 | | Na+/H+ antiporter NhaA | 0.34 | QEN71_RS36960 | | response regulator transcription factor | low | > 153 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00520 | | Sodium/proton antiporter NhaA | 0.54 | MIT1002_02154 | | Response regulator UvrY | low | > 70 |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_02315 | | Na(+)/H(+) antiporter NhaA | 0.25 | MPMX19_03688 | | Response regulator UvrY | low | > 112 |
| Lysobacter sp. OAE881 | 0.46 | ABIE51_RS04100 | | Na+/H+ antiporter NhaA | 0.40 | ABIE51_RS11810 | | response regulator | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_4210 | | sodium/proton antiporter, NhaA family | 0.56 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.45 | CA265_RS05070 | | Na+/H+ antiporter NhaA | 0.28 | CA265_RS06400 | | DNA-binding response regulator | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_4210 | | sodium/proton antiporter, NhaA family | 0.56 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | — | — |
| Bosea sp. OAE506 | 0.45 | ABIE41_RS19785 | | Na+/H+ antiporter NhaA | 0.17 | ABIE41_RS15410 | | response regulator transcription factor | low | > 77 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS12965 | | sodium:proton antiporter | 0.25 | AZOBR_RS27860 | | regulator | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS12285 | | Na+/H+ antiporter NhaA | 0.27 | AMB_RS06830 | | DNA-binding response regulator | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_2282 | | sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) | 0.24 | Ga0059261_3917 | | two component transcriptional regulator, LuxR family | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.39 | DvMF_2989 | | Na+/H+ antiporter NhaA (RefSeq) | 0.26 | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | low | > 51 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS27960 | | Na+/H+ antiporter NhaA | 0.25 | ABIE40_RS23610 | | response regulator transcription factor | low | > 107 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.36 | GFF4701 | | Na+/H+ antiporter NhaA type | 0.37 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | low | > 90 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.36 | BT0634 | | Na+/H+ antiporter 1 (NCBI ptt file) | 0.16 | BT0156 | | transcriptional regulator (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.35 | HMPREF1181_RS16585 | | Na+/H+ antiporter NhaA | 0.21 | HMPREF1181_RS04510 | | response regulator transcription factor | low | > 56 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.33 | Echvi_4461 | | Na+/H+ antiporter NhaA | 0.31 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 79 |
| Sinorhizobium meliloti 1021 | 0.31 | SMa1913 | | Na+/H+ antiporter | 0.25 | SM_b21520 | | two-component response regulator protein | low | > 103 |
| Bifidobacterium breve UCC2003 | 0.26 | BBR_RS14540 | | Na+/H+ antiporter NhaA | 0.22 | BBR_RS15990 | | DNA-binding response regulator | low | > 34 |
Not shown: 8 genomes with orthologs for BWI76_RS04315 only; 30 genomes with orthologs for BWI76_RS18335 only