| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS05165 | | cobalamin-binding protein | 1.0 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.34 | 17 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF63 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.94 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Escherichia coli ECRC99 | 0.74 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC62 | 0.74 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli ECRC101 | 0.74 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia coli ECRC100 | 0.74 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.74 | OHPLBJKB_03504 | | Vitamin B12-binding protein | 0.94 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
| Escherichia coli ECOR27 | 0.74 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli BW25113 | 0.74 | b0158 | btuF | vitamin B12-transporter protein BtuF (NCBI) | 0.94 | b3772 | ilvA | threonine dehydratase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.74 | EFB2_03886 | | Vitamin B12-binding protein | 0.94 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Escherichia coli ECRC102 | 0.74 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC98 | 0.74 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Escherichia coli BL21 | 0.74 | ECD_00157 | | vitamin B12 ABC transporter periplasmic binding protein | 0.94 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | low | > 61 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_00844 | | Vitamin B12-binding protein | 0.94 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.30 | 30 |
| Escherichia coli ECOR38 | 0.74 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.95 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.62 | 21 |
| Escherichia coli Nissle 1917 | 0.74 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.94 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | — | — |
| Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_3747 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.94 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | low | > 76 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_03570 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.84 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Rahnella sp. WP5 | 0.52 | EX31_RS03185 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.82 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | low | > 89 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS15875 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.86 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Pantoea sp. MT58 | 0.50 | IAI47_15575 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.84 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS17100 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.84 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS16015 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.87 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS05645 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.84 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_12055 | | cobalamin-binding protein | 0.68 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS04880 | | cobalamin-binding protein | 0.50 | BPHYT_RS11065 | | threonine dehydratase | — | — |
| Paraburkholderia graminis OAS925 | 0.30 | ABIE53_001251 | | iron complex transport system substrate-binding protein | 0.49 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.30 | QEN71_RS25115 | | cobalamin-binding protein | 0.50 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS00060 | | cobalamin-binding protein | 0.47 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.30 | RALBFv3_RS04465 | | cobalamin-binding protein | 0.48 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Ralstonia solanacearum UW163 | 0.30 | UW163_RS09205 | | cobalamin-binding protein | 0.48 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum GMI1000 | 0.29 | RS_RS12020 | | cobalamin-binding protein | 0.50 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS12905 | | cobalamin-binding protein | 0.50 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | low | > 81 |
| Shewanella sp. ANA-3 | 0.28 | Shewana3_3272 | | periplasmic binding protein (RefSeq) | 0.56 | Shewana3_0359 | | threonine dehydratase (RefSeq) | low | > 73 |
| Marinobacter adhaerens HP15 | 0.28 | HP15_3954 | | substrate-binding periplasmic (PBP) ABC transporter protein | 0.54 | HP15_3213 | | threonine dehydratase biosynthetic | low | > 73 |
| Shewanella oneidensis MR-1 | 0.28 | SO3709 | | ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) | 0.58 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.27 | Sama_2869 | | ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) | 0.58 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.82 | 45 |
| Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS16095 | | cobalamin-binding protein | 0.46 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Dechlorosoma suillum PS | 0.26 | Dsui_0539 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.50 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
| Shewanella loihica PV-4 | 0.26 | Shew_0719 | | periplasmic binding protein (RefSeq) | 0.55 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.71 | 27 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_25220 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.49 | PS417_27010 | | threonine dehydratase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS26855 | | cobalamin-binding protein | 0.48 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS26855 | | cobalamin-binding protein | 0.48 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.22 | AO356_14980 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.49 | AO356_10330 | | threonine dehydratase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_4929 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.49 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.20 | AO353_06665 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.50 | AO353_08485 | | threonine dehydratase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.19 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.51 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Pseudomonas sp. RS175 | 0.19 | PFR28_03939 | | Vitamin B12-binding protein | 0.49 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.19 | Pf1N1B4_2659 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.49 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.19 | Psest_3542 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.50 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.18 | PfGW456L13_1323 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.49 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Pseudomonas putida KT2440 | 0.16 | PP_0524 | | putative Periplasmic cobalamin-binding protein HutB | 0.51 | PP_3446 | | threonine deaminase | low | > 96 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF3984 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.51 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 90 |
| Variovorax sp. SCN45 | 0.14 | GFF447 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.50 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
| Variovorax sp. OAS795 | 0.13 | ABID97_RS17410 | | helical backbone metal receptor | 0.49 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.11 | Ac3H11_988 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.50 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 79 |
Not shown: 3 genomes with orthologs for BWI76_RS05165 only; 14 genomes with orthologs for BWI76_RS00980 only