Conservation of cofitness between BPHYT_RS19690 and BPHYT_RS16855 in Burkholderia phytofirmans PsJN

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS19690 AraC family transcriptional regulator 1.0 BPHYT_RS16855 16S rRNA methyltransferase 0.36 13
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_02337 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase 0.86 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase low > 103
Paraburkholderia graminis OAS925 0.76 ABIE53_000315 AraC family transcriptional regulator of adaptative response/methylated-DNA-[protein]-cysteine methyltransferase 0.86 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase low > 113
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS29610 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.77 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 153
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_07195 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.33 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 52
Pectobacterium carotovorum WPP14 0.41 HER17_RS17095 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.32 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Escherichia coli BL21 0.40 ECD_02140 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase 0.36 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC98 0.40 JDDGAC_27170 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 86
Escherichia coli ECRC99 0.40 KEDOAH_04975 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC102 0.40 NIAGMN_20975 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECRC100 0.40 OKFHMN_23210 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 80
Escherichia coli ECRC101 0.40 MCAODC_14260 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 87
Escherichia coli BW25113 0.40 b2213 ada fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI) 0.36 b2946 yggJ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC62 0.40 BNILDI_13705 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01497 Bifunctional transcriptional activator/DNA repair enzyme Ada 0.36 OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E low > 73
Escherichia coli ECOR27 0.40 NOLOHH_14785 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 75
Escherichia coli Nissle 1917 0.40 ECOLIN_RS12925 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Escherichia coli ECOR38 0.40 HEPCGN_22475 ada bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E low > 87
Escherichia fergusonii Becca 0.40 EFB2_01642 Bifunctional transcriptional activator/DNA repair enzyme Ada 0.36 EFB2_00956 Ribosomal RNA small subunit methyltransferase E low > 86
Klebsiella michiganensis M5al 0.39 BWI76_RS19895 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase 0.33 BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 92
Rhodanobacter denitrificans MT42 0.39 LRK55_RS17970 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.36 LRK55_RS03930 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 63
Rahnella sp. WP5 0.39 EX31_RS21655 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.37 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 89
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS18115 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.37 LRK54_RS04160 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.32 19
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS08345 AraC family transcriptional regulator 0.46 HSERO_RS07110 16S rRNA methyltransferase low > 78
Azospirillum sp. SherDot2 0.38 MPMX19_04309 Bifunctional transcriptional activator/DNA repair enzyme Ada 0.17 MPMX19_00577 Ribosomal RNA small subunit methyltransferase E low > 112
Enterobacter asburiae PDN3 0.38 EX28DRAFT_0363 O-6-methylguanine DNA methyltransferase 0.34 EX28DRAFT_2984 RNA methyltransferase, RsmE family low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12035 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.44 RPSI07_RS11365 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 81
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS14505 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.33 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS14505 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.33 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_2914 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.33 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_5024 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.33 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) — —
Ralstonia solanacearum GMI1000 0.37 RS_RS12885 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.43 RS_RS13825 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 80
Pseudomonas simiae WCS417 0.37 PS417_14105 6-O-methylguanine DNA methyltransferase 0.33 PS417_26545 16S rRNA methyltransferase low > 88
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS00900 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.46 ABZR87_RS01505 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3365 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 0.34 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3365 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 0.34 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase low > 86
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2183 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.38 Ac3H11_4323 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 79
Pseudomonas putida KT2440 0.36 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator 0.35 PP_4985 16S rRNA m3U1498 methyltransferase low > 96
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_27015 6-O-methylguanine DNA methyltransferase 0.33 AO353_08050 16S rRNA methyltransferase low > 101
Enterobacter sp. TBS_079 0.36 MPMX20_03173 Bifunctional transcriptional activator/DNA repair enzyme Ada 0.34 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E low > 85
Pseudomonas sp. RS175 0.35 PFR28_02493 Bifunctional transcriptional activator/DNA repair enzyme Ada 0.32 PFR28_04209 Ribosomal RNA small subunit methyltransferase E low > 88
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_436 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.33 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1827 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 0.34 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) low > 78
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_22755 6-O-methylguanine DNA methyltransferase 0.33 AO356_13565 16S rRNA methyltransferase low > 104
Pseudomonas stutzeri RCH2 0.35 Psest_0730 O-6-methylguanine DNA methyltransferase 0.33 Psest_0305 RNA methyltransferase, RsmE family low > 67
Dechlorosoma suillum PS 0.35 Dsui_3097 O-6-methylguanine DNA methyltransferase 0.40 Dsui_1568 RNA methyltransferase, RsmE family — —
Ralstonia solanacearum UW163 0.35 UW163_RS08360 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.46 UW163_RS07745 16S rRNA (uracil(1498)-N(3))-methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05265 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada 0.46 RALBFv3_RS05880 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 76
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_1426 O-6-methylguanine DNA methyltransferase 0.19 Ga0059261_0807 RNA methyltransferase, RsmE family low > 68
Pseudomonas sp. S08-1 0.34 OH686_07465 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase / ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase 0.34 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase low > 80
Phaeobacter inhibens DSM 17395 0.24 PGA1_c02760 putative methylated-DNA--protein-cysteine methyltransferase 0.19 PGA1_c02950 RNA methyltransferase-like protein low > 62
Sinorhizobium meliloti 1021 0.23 SMc01728 transcriptional regulator 0.16 SMc00826 16S ribosomal RNA methyltransferase RsmE low > 103

Not shown: 0 genomes with orthologs for BPHYT_RS19690 only; 44 genomes with orthologs for BPHYT_RS16855 only