Conservation of cofitness between BPHYT_RS16245 and BPHYT_RS02590 in Burkholderia phytofirmans PsJN

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 1.0 BPHYT_RS02590 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.77 18
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.93 H281DRAFT_02004 phosphoglycerate mutase
Paraburkholderia graminis OAS925 0.92 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.93 ABIE53_000663 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.91 QEN71_RS01445 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.39 128
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.77 HSERO_RS00820 phosphoglyceromutase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.80 RR42_RS01825 phosphoglyceromutase
Variovorax sp. SCN45 0.49 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.74 GFF2569 Phosphoglycerate mutase (EC 5.4.2.11)
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.79 ABZR87_RS06750 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum GMI1000 0.49 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.79 RS_RS01740 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.78 RPSI07_RS22410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.79 RALBFv3_RS10900 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Ralstonia solanacearum UW163 0.49 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.79 UW163_RS02680 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.73 GFF1226 Phosphoglycerate mutase (EC 5.4.2.1)
Castellaniella sp019104865 MT123 0.48 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 ABCV34_RS14270 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Variovorax sp. OAS795 0.48 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 ABID97_RS07385 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.73 Ac3H11_3856 Phosphoglycerate mutase (EC 5.4.2.1)
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.48 CCNA_02344 phosphoglycerate mutase low > 67
Caulobacter crescentus NA1000 0.36 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.48 CCNA_02344 phosphoglycerate mutase
Sinorhizobium meliloti 1021 0.35 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.37 SMc02838 phosphoglyceromutase low > 103
Rhizobium sp. OAE497 0.35 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.36 ABIE40_RS00580 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 0.80 63
Azospirillum sp. SherDot2 0.34 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 MPMX19_04192 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Azospirillum brasilense Sp245 0.34 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.51 AZOBR_RS19425 phosphoglyceromutase
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 A4249_RS15385 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Bifidobacterium breve UCC2003 0.30 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.52 BBR_RS18590 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.51 Ga0059261_3169 phosphoglycerate mutase, BPG-dependent, family 1
Mycobacterium tuberculosis H37Rv 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.49 Rv0489 Probable phosphoglycerate mutase 1 Gpm1 (phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 OKGIIK_16060 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.70 ABZR86_RS13515 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.57 Xcc-8004.1763.1 Phosphoglycerate mutase (EC 5.4.2.1) low > 74
Rhodanobacter denitrificans MT42 0.26 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 LRK55_RS09465 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 LRK54_RS09805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Alteromonas macleodii MIT1002 0.25 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.63 MIT1002_00378 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 ABZR88_RS10100 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.66 GFF648 Phosphoglycerate mutase (EC 5.4.2.1) low > 78
Klebsiella michiganensis M5al 0.20 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 BWI76_RS08605 phosphoglyceromutase low > 92
Rahnella sp. WP5 0.20 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.62 EX31_RS23555 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Serratia liquefaciens MT49 0.20 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 IAI46_06410 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.64 EX28DRAFT_2240 phosphoglycerate mutase, BPG-dependent, family 1
Pantoea sp. MT58 0.19 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 IAI47_13600 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli BW25113 0.19 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.66 b0755 gpmA phosphoglyceromutase (NCBI) low > 76
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 ECOLIN_RS04020 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 55
Escherichia coli ECOR38 0.19 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 HEPCGN_01540 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 87
Enterobacter sp. TBS_079 0.19 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.65 MPMX20_01382 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 85
Escherichia coli ECOR27 0.19 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 NOLOHH_23165 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia fergusonii Becca 0.19 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.66 EFB2_03351 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 86
Escherichia coli BL21 0.19 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.66 ECD_00708 phosphoglyceromutase 1 low > 61
Escherichia coli ECRC99 0.19 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 KEDOAH_21230 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Escherichia coli ECRC100 0.19 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 OKFHMN_06735 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 80
Escherichia coli ECRC101 0.19 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 MCAODC_25955 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase 0.60 65
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.66 OHPLBJKB_02958 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase low > 73
Escherichia coli ECRC98 0.19 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 JDDGAC_10390 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 86
Escherichia coli ECRC62 0.19 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 BNILDI_21160 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase low > 75
Escherichia coli ECRC102 0.19 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 NIAGMN_04785 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dianthicola ME23 0.18 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 DZA65_RS06965 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dianthicola 67-19 0.18 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 HGI48_RS06610 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Pectobacterium carotovorum WPP14 0.18 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 HER17_RS14800 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Dickeya dadantii 3937 0.18 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 DDA3937_RS06570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
Erwinia tracheiphila SCR3 0.18 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 LU632_RS15920 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase

Not shown: 35 genomes with orthologs for BPHYT_RS16245 only; 9 genomes with orthologs for BPHYT_RS02590 only