Conservation of cofitness between BPHYT_RS30145 and BPHYT_RS02415 in Burkholderia phytofirmans PsJN

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30145 aconitate hydratase 1.0 BPHYT_RS02415 cytochrome C550 0.22 19
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_02981 aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.96 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 low > 103
Paraburkholderia graminis OAS925 0.96 ABIE53_005043 iron-sulfur-dependent 2-methylisocitrate dehydratase 0.96 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) low > 113
Cupriavidus basilensis FW507-4G11 0.93 RR42_RS11270 aconitate hydratase 0.59 RR42_RS01680 cytochrome C550 low > 128
Paraburkholderia sabiae LMG 24235 0.87 QEN71_RS31060 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.85 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein low > 153
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS11425 aconitate hydratase 0.49 HSERO_RS21530 cytochrome C550 — —
Shewanella sp. ANA-3 0.86 Shewana3_3827 aconitate hydratase (RefSeq) 0.34 Shewana3_0991 penicillin-binding protein 6 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.86 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) 0.34 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_4116 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.36 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_00890 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.37 AO353_06455 D-alanyl-D-alanine carboxypeptidase low > 101
Ralstonia solanacearum GMI1000 0.85 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.57 RS_RS01610 D-alanyl-D-alanine carboxypeptidase low > 80
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3821 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.37 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Ralstonia sp. UNC404CL21Col 0.84 ABZR87_RS16735 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.57 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.37 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Ralstonia solanacearum PSI07 0.84 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.58 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase low > 81
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_20875 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.37 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Variovorax sp. SCN45 0.84 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) 0.43 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 127
Pseudomonas simiae WCS417 0.84 PS417_21070 aconitate hydratase 0.38 PS417_24705 D-alanyl-D-alanine carboxypeptidase low > 88
Pseudomonas sp. RS175 0.84 PFR28_02925 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.37 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC 0.39 31
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.38 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.38 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Dyella japonica UNC79MFTsu3.2 0.84 ABZR86_RS08435 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.41 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein — —
Lysobacter sp. OAE881 0.84 ABIE51_RS09495 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.40 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein — —
Pseudomonas putida KT2440 0.83 PP_2336 aconitate hydratase 1 0.37 PP_4803 D-alanyl-D-alanine carboxypeptidase low > 96
Kangiella aquimarina DSM 16071 0.83 B158DRAFT_1345 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent 0.38 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase — —
Xanthomonas campestris pv. campestris strain 8004 0.83 Xcc-8004.3979.1 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.38 Xcc-8004.907.1 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 74
Ralstonia solanacearum IBSBF1503 0.83 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.56 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase low > 76
Ralstonia solanacearum UW163 0.83 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.56 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase — —
Shewanella amazonensis SB2B 0.82 Sama_3296 aconitate hydratase (RefSeq) 0.34 Sama_2592 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) — —
Alteromonas macleodii MIT1002 0.82 MIT1002_03131 Aconitate hydratase 1 0.36 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —
Shewanella loihica PV-4 0.82 Shew_1822 aconitate hydratase (RefSeq) 0.34 Shew_2939 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.82 HP15_1930 aconitate hydratase 1 0.39 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Pseudomonas sp. S08-1 0.81 OH686_01680 2-methylisocitrate dehydratase, Fe/S-dependent 0.36 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_2319 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent 0.39 Psest_0516 D-alanyl-D-alanine carboxypeptidase — —
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.35 CSW01_04845 D-alanyl-D-alanine carboxypeptidase 0.40 39
Acinetobacter radioresistens SK82 0.78 MPMX26_02481 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.36 MPMX26_01051 D-alanyl-D-alanine carboxypeptidase DacA low > 36
Acidovorax sp. GW101-3H11 0.77 Ac3H11_2323 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.42 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —

Not shown: 8 genomes with orthologs for BPHYT_RS30145 only; 44 genomes with orthologs for BPHYT_RS02415 only