Conservation of cofitness between B158DRAFT_2180 and B158DRAFT_1954 in Kangiella aquimarina DSM 16071

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE 1.0 B158DRAFT_1954 protease FtsH subunit HflK 0.63 6
Shewanella loihica PV-4 0.72 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) 0.36 Shew_0568 HflK protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.71 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) 0.37 Shewana3_0599 HflK protein (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) 0.36 SO0605 hflK hflK protein (NCBI ptt file) — —
Pseudomonas sp. S08-1 0.70 OH686_20045 RNA polymerase sigma factor RpoE 0.35 OH686_09460 HflK protein low > 80
Alteromonas macleodii MIT1002 0.70 MIT1002_02719 Sigma-24 0.37 MIT1002_03786 Modulator of FtsH protease HflK — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_12485 RNA polymerase sigma factor RpoE 0.33 CSW01_01845 protease modulator HflK — —
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_17625 RNA polymerase subunit sigma 0.35 AO353_13155 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT 0.34 Pf6N2E2_3612 HflK protein low > 103
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4516 RNA polymerase sigma-H factor AlgT 0.32 PfGW456L13_152 HflK protein low > 87
Pseudomonas stutzeri RCH2 0.69 Psest_3100 RNA polymerase sigma factor RpoE 0.31 Psest_0685 HflK protein — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3323 RNA polymerase sigma-H factor AlgT 0.35 Pf1N1B4_1410 HflK protein — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS07230 RNA polymerase sigma factor RpoE 0.37 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas simiae WCS417 0.69 PS417_07120 RNA polymerase sigma-H factor 0.34 PS417_02500 membrane protein — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS07230 RNA polymerase sigma factor RpoE 0.37 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas sp. RS175 0.69 PFR28_00690 RNA polymerase sigma-H factor 0.35 PFR28_05123 Modulator of FtsH protease HflK 0.40 78
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_04575 RNA polymerase subunit sigma 0.36 AO356_08645 hypothetical protein low > 104
Escherichia coli Nissle 1917 0.69 ECOLIN_RS14560 RNA polymerase sigma factor RpoE 0.32 ECOLIN_RS24240 FtsH protease activity modulator HflK — —
Escherichia coli ECOR38 0.69 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE 0.32 HEPCGN_10475 hflK FtsH protease activity modulator HflK — —
Pseudomonas putida KT2440 0.69 PP_1427 RNA polymerase sigma E factor 0.34 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Escherichia coli BW25113 0.69 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) 0.31 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) — —
Escherichia fergusonii Becca 0.69 EFB2_01323 ECF RNA polymerase sigma-E factor 0.32 EFB2_04361 Modulator of FtsH protease HflK — —
Escherichia coli BL21 0.69 ECD_02467 RNA polymerase sigma E factor 0.31 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor — —
Escherichia coli ECRC99 0.69 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE 0.31 KEDOAH_15910 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECOR27 0.69 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE 0.31 NOLOHH_04510 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC62 0.69 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE 0.31 BNILDI_06980 hflK FtsH protease activity modulator HflK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_01134 ECF RNA polymerase sigma-E factor 0.31 OHPLBJKB_03868 Modulator of FtsH protease HflK — —
Escherichia coli ECRC98 0.69 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE 0.31 JDDGAC_15885 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC101 0.69 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE 0.31 MCAODC_02760 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC102 0.69 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE 0.31 NIAGMN_10095 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC100 0.69 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE 0.31 OKFHMN_12245 hflK FtsH protease activity modulator HflK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2107 RNA polymerase sigma factor RpoE 0.30 GFF827 HflK protein — —
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0072 RNA polymerase sigma factor RpoE 0.32 EX28DRAFT_3371 HflK protein — —
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.35 Psyr_0574 protease FtsH subunit HflK low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.35 Psyr_0574 protease FtsH subunit HflK low > 86
Enterobacter sp. TBS_079 0.68 MPMX20_03444 ECF RNA polymerase sigma-E factor 0.31 MPMX20_00455 Modulator of FtsH protease HflK — —
Rahnella sp. WP5 0.67 EX31_RS21800 RNA polymerase sigma factor RpoE 0.31 EX31_RS08810 FtsH protease activity modulator HflK — —
Pantoea sp. MT58 0.67 IAI47_04850 RNA polymerase sigma factor RpoE 0.32 IAI47_02600 FtsH protease activity modulator HflK — —
Dickeya dadantii 3937 0.67 DDA3937_RS15765 RNA polymerase sigma factor RpoE 0.30 DDA3937_RS18600 FtsH protease activity modulator HflK low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS15850 RNA polymerase sigma factor RpoE 0.30 HGI48_RS18535 FtsH protease activity modulator HflK low > 71
Serratia liquefaciens MT49 0.67 IAI46_19585 RNA polymerase sigma factor RpoE 0.29 IAI46_01635 FtsH protease activity modulator HflK — —
Dickeya dianthicola ME23 0.67 DZA65_RS16930 RNA polymerase sigma factor RpoE 0.30 DZA65_RS19670 FtsH protease activity modulator HflK low > 75
Pectobacterium carotovorum WPP14 0.67 HER17_RS05780 RNA polymerase sigma factor RpoE 0.30 HER17_RS02595 FtsH protease activity modulator HflK — —
Klebsiella michiganensis M5al 0.66 BWI76_RS21355 RNA polymerase sigma factor RpoE 0.30 BWI76_RS02545 protease modulator HflK — —
Erwinia tracheiphila SCR3 0.66 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE 0.31 LU632_RS02065 hflK FtsH protease activity modulator HflK low > 74
Shewanella amazonensis SB2B 0.66 Sama_0874 RNA polymerase sigma factor RpoE (RefSeq) 0.34 Sama_3023 hflK protein (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE 0.28 OKGIIK_06640 hflK FtsH protease activity modulator HflK 0.75 36
Rhodanobacter denitrificans MT42 0.65 LRK55_RS16655 RNA polymerase sigma factor RpoE 0.28 LRK55_RS00390 FtsH protease activity modulator HflK — —
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS16940 RNA polymerase sigma factor RpoE 0.28 LRK54_RS00620 FtsH protease activity modulator HflK 0.85 29
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS07180 RNA polymerase sigma factor RpoE 0.24 ABZR86_RS08355 FtsH protease activity modulator HflK low > 74
Dechlorosoma suillum PS 0.62 Dsui_2453 RNA polymerase sigma factor RpoE 0.29 Dsui_3135 HflK protein — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS19015 RNA polymerase sigma factor RpoE 0.28 RPSI07_RS18065 FtsH protease activity modulator HflK low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS05225 RNA polymerase sigma factor RpoE 0.26 RS_RS06120 FtsH protease activity modulator HflK low > 80
Lysobacter sp. OAE881 0.62 ABIE51_RS13890 RNA polymerase sigma factor RpoE 0.20 ABIE51_RS06550 FtsH protease activity modulator HflK low > 62
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE 0.20 Xcc-8004.3955.1 HflK protein low > 74
Castellaniella sp019104865 MT123 0.54 ABCV34_RS08355 RNA polymerase sigma factor RpoE 0.30 ABCV34_RS02660 FtsH protease activity modulator HflK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3339 RNA polymerase sigma factor RpoE 0.26 GFF4856 HflK protein 0.69 27
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_2047 RNA polymerase sigma factor, sigma-70 family 0.21 Echvi_2033 HflK protein low > 79
Bosea sp. OAE506 0.19 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor 0.24 ABIE41_RS12850 FtsH protease activity modulator HflK low > 77

Not shown: 26 genomes with orthologs for B158DRAFT_2180 only; 12 genomes with orthologs for B158DRAFT_1954 only