Conservation of cofitness between Atu2582 and Atu4148 in Agrobacterium fabrum C58

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2582 UDP-glucose/GDP-mannose dehydrogenase 1.0 Atu4148 UDP-glucuronic acid epimerase 0.88 9
Rhizobium sp. OAE497 0.75 ABIE40_RS19745 nucleotide sugar dehydrogenase 0.69 ABIE40_RS14855 NAD-dependent epimerase low > 107
Sinorhizobium meliloti 1021 0.75 SM_b21256 nucleotide sugar oxidase 0.80 SMc02640 UDP-glucuronic acid epimerase low > 103
Bosea sp. OAE506 0.62 ABIE41_RS14415 nucleotide sugar dehydrogenase 0.47 ABIE41_RS10525 NAD-dependent epimerase low > 77
Azospirillum brasilense Sp245 0.61 AZOBR_RS23650 UDP-N-acetyl-D-glucosamine dehydrogenase 0.44 AZOBR_RS09110 UDP-glucose/glucuronate epimerase — —
Azospirillum sp. SherDot2 0.59 MPMX19_06712 UDP-N-acetyl-D-glucosamine 6-dehydrogenase 0.43 MPMX19_01802 UDP-N-acetylglucosamine 4-epimerase — —
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase 0.48 AO356_26320 protein CapI low > 104
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU3176 UDP-glucose/GDP-mannose dehydrogenase family protein (TIGR) 0.50 DVU3356 NAD-dependent epimerase/dehydratase family protein (TIGR) — —
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2607.1 Polysaccharide biosynthetic protein 0.41 Xcc-8004.4890.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 74
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_2494 nucleotide sugar dehydrogenase (RefSeq) 0.47 DvMF_2048 NAD-dependent epimerase/dehydratase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_12470 UDP-N-acetyl-D-galactosamine dehydrogenase 0.45 CA264_00975 NAD-dependent epimerase low > 74
Lysobacter sp. OAE881 0.27 ABIE51_RS07835 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.45 ABIE51_RS07830 NAD-dependent epimerase 0.48 44
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_4400 nucleotide sugar dehydrogenase 0.50 Echvi_2328 Nucleoside-diphosphate-sugar epimerases low > 79
Castellaniella sp019104865 MT123 0.27 ABCV34_RS09370 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.17 ABCV34_RS09365 SDR family oxidoreductase — —
Marinobacter adhaerens HP15 0.27 HP15_p187g68 UDP-glucose/GDP-mannose dehydrogenase family protein 0.50 HP15_2023 UDP-glucuronic acid epimerase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS16180 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.49 ABZR86_RS09700 NAD-dependent epimerase 0.31 44
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS23345 nucleotide sugar dehydrogenase 0.16 BPHYT_RS23350 NAD-dependent epimerase/dehydratase low > 109
Magnetospirillum magneticum AMB-1 0.27 AMB_RS00730 nucleotide sugar dehydrogenase 0.41 AMB_RS10910 nucleoside-diphosphate sugar epimerase — —
Shewanella oneidensis MR-1 0.27 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) 0.47 SO4686 NAD dependent epimerase/dehydratase family protein (NCBI ptt file) low > 76
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS11970 nucleotide sugar dehydrogenase 0.50 LRK54_RS03235 NAD-dependent epimerase — —
Rhodanobacter denitrificans MT42 0.26 LRK55_RS11695 nucleotide sugar dehydrogenase 0.50 LRK55_RS02985 NAD-dependent epimerase — —
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS13730 UDP-N-acetyl-D-galactosamine dehydrogenase 0.18 HSERO_RS20975 UDP-galactose-4-epimerase low > 78
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_11915 wecC Vi polysaccharide biosynthesis protein VipA/TviB 0.49 OKGIIK_10115 Capsular biosynthesis protein CpsI — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS08975 nucleotide sugar dehydrogenase 0.45 ABZR88_RS08900 NAD-dependent epimerase low > 71
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_2513 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.49 Pf6N2E2_1139 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS07910 UDP-N-acetyl-D-galactosamine dehydrogenase 0.46 CA265_RS07970 NAD-dependent epimerase low > 88
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_3106 nucleotide sugar dehydrogenase 0.59 Ga0059261_4077 Nucleoside-diphosphate-sugar epimerases — —
Phaeobacter inhibens DSM 17395 0.24 PGA1_262p02300 UDP-glucose/GDP-mannose dehydrogenase 0.53 PGA1_65p00440 UDP-glucuronate 5'-epimerase — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4457 nucleotide sugar dehydrogenase 0.50 EX28DRAFT_0531 Nucleoside-diphosphate-sugar epimerases low > 76
Enterobacter sp. TBS_079 0.23 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase 0.50 MPMX20_03010 UDP-glucose 4-epimerase low > 85
Klebsiella michiganensis M5al 0.23 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.50 BWI76_RS18995 NAD-dependent epimerase — —
Rahnella sp. WP5 0.23 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase 0.49 EX31_RS10090 NAD-dependent epimerase low > 89
Serratia liquefaciens MT49 0.23 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase 0.50 IAI46_14235 NAD-dependent epimerase — —
Shewanella amazonensis SB2B 0.22 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) 0.49 Sama_2235 NAD dependent epimerase/dehydratase family protein (RefSeq) low > 62
Bacteroides thetaiotaomicron VPI-5482 0.22 BT0602 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI ptt file) 0.45 BT1342 putative UDP-glucuronic acid epimerase (NCBI ptt file) low > 81
Erwinia tracheiphila SCR3 0.22 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.48 LU632_RS12910 NAD-dependent epimerase low > 74
Pantoea sp. MT58 0.22 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.51 IAI47_09040 NAD-dependent epimerase low > 76
Pseudomonas sp. RS175 0.21 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase 0.43 PFR28_02769 UDP-N-acetylglucosamine 4-epimerase low > 88
Dickeya dadantii 3937 0.20 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase 0.52 DDA3937_RS06785 NAD-dependent epimerase — —
Dickeya dianthicola ME23 0.20 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase 0.53 DZA65_RS07160 NAD-dependent epimerase — —
Dickeya dianthicola 67-19 0.20 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase 0.53 HGI48_RS06820 NAD-dependent epimerase — —

Not shown: 32 genomes with orthologs for Atu2582 only; 14 genomes with orthologs for Atu4148 only