Conservation of cofitness between Atu3181 and Atu4096 in Agrobacterium fabrum C58

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3181 hypothetical protein 1.0 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.27 2
Rhizobium sp. OAE497 0.83 ABIE40_RS10955 zinc metallochaperone GTPase ZigA 0.82 ABIE40_RS23265 carboxylating nicotinate-nucleotide diphosphorylase low > 107
Rhodopseudomonas palustris CGA009 0.71 TX73_007510 GTP-binding protein 0.51 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase
Xanthobacter sp. DMC5 0.68 GFF1508 Putative metal chaperone YciC 0.66 GFF1849 putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
Bosea sp. OAE506 0.68 ABIE41_RS15395 GTP-binding protein 0.42 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase low > 77
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12720 hypothetical protein 0.35 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase low > 78
Variovorax sp. SCN45 0.59 GFF7058 Zinc-binding GTPase YciC 0.33 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 127
Phaeobacter inhibens DSM 17395 0.59 PGA1_c20610 putative metal chaperone 0.50 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase low > 62
Methylophilus sp. DMC18 0.57 GFF601 Putative metal chaperone YciC 0.35 GFF2544 Nicotinate-nucleotide pyrophosphorylase [carboxylating]
Pectobacterium carotovorum WPP14 0.56 HER17_RS10375 zinc metallochaperone GTPase ZigA 0.35 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase low > 75
Acinetobacter baumannii LAC-4 0.56 RR41_RS00360 zinc metallochaperone GTPase ZigA 0.32 RR41_RS18680 carboxylating nicotinate-nucleotide diphosphorylase 0.34 43
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS07270 GTP-binding protein 0.31 PagCFBP13505_RS13155 carboxylating nicotinate-nucleotide diphosphorylase low > 74
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_11940 4-hydroxytetrahydrobiopterin dehydratase 0.35 AO356_07370 nicotinate-nucleotide pyrophosphorylase low > 104
Pantoea sp. MT58 0.54 IAI47_21320 GTP-binding protein 0.32 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase low > 76
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4263 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.35 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 103
Pseudomonas sp. RS175 0.54 PFR28_04533 Putative metal chaperone YciC 0.38 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 88
Pseudomonas sp. DMC3 0.54 GFF522 Putative metal chaperone YciC 0.37 GFF4996 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 89
Alteromonas macleodii MIT1002 0.53 MIT1002_02552 Putative metal chaperone YciC 0.36 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating]
Pseudomonas fluorescens SBW25 0.53 PFLU_RS29950 GTP-binding protein 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS29950 GTP-binding protein 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase low > 109
Pseudomonas simiae WCS417 0.53 PS417_28285 hypothetical protein 0.38 PS417_03925 nicotinate-nucleotide pyrophosphorylase low > 88
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00125 Putative metal chaperone YciC 0.38 GEMAOFIL_00989 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 96
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_1994 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.38 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 87
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_713 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.35 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 87
Pseudomonas sp. S08-1 0.53 OH686_23515 Zinc-binding GTPase YciC 0.35 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) low > 80
Pseudomonas segetis P6 0.53 MPMX49_00203 Putative metal chaperone YciC 0.36 MPMX49_03901 Nicotinate-nucleotide pyrophosphorylase [carboxylating]
Pseudomonas sp. SVBP6 0.53 COO64_RS01890 zigA zinc metallochaperone GTPase ZigA 0.38 COO64_RS03520 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 93
Pseudomonas stutzeri RCH2 0.53 Psest_0747 Putative GTPases (G3E family) 0.37 Psest_0718 nicotinate-nucleotide pyrophosphorylase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_10110 4-hydroxytetrahydrobiopterin dehydratase 0.36 AO353_05520 nicotinate-nucleotide pyrophosphorylase low > 101
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 86
Pseudomonas orientalis W4I3 0.52 QF045_RS02650 zinc metallochaperone GTPase ZigA 0.39 QF045_RS06900 carboxylating nicotinate-nucleotide diphosphorylase low > 93
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS58405 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.36 DQ20_RS56315 nadC;go_function=nicotinate-nucleotide carboxylating nicotinate-nucleotide diphosphorylase low > 101
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS25980 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.36 DY961_RS23850 nadC;go_function=nicotinate-nucleotide carboxylating nicotinate-nucleotide diphosphorylase low > 100
Pseudomonas putida KT2440 0.52 PP_5361 47 kDa protein 0.36 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.16 90
Pseudomonas aeruginosa PA14 0.52 IKLFDK_25735 zinc metallochaperone GTPase ZigA 0.36 IKLFDK_01460 carboxylating nicotinate-nucleotide diphosphorylase low > 98
Pseudomonas sp. BP01 0.52 JOY50_RS08690 zigA zinc metallochaperone GTPase ZigA 0.36 JOY50_RS19345 nadC carboxylating nicotinate-nucleotide diphosphorylase low > 84
Rahnella sp. WP5 0.52 EX31_RS15695 GTP-binding protein 0.34 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase low > 89
Serratia liquefaciens MT49 0.51 IAI46_13510 GTP-binding protein 0.32 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase low > 87
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS05105 zinc metallochaperone GTPase ZigA 0.38 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase low > 80
Ralstonia solanacearum UW163 0.50 UW163_RS03940 GTP-binding protein 0.36 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating)
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS01025 GTPase 0.41 RR42_RS21245 nicotinate-nucleotide pyrophosphorylase low > 128
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS09640 GTP-binding protein 0.36 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) low > 76
Ralstonia solanacearum GMI1000 0.50 RS_RS00225 GTP-binding protein 0.34 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) low > 80
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.333.1 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.30 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) low > 74
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23725 GTP-binding protein 0.36 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) low > 81
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS19585 cobalamin biosynthesis protein CobW 0.33 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_02358 GTPase, G3E family 0.31 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_2702 Putative GTPases (G3E family) 0.36 Echvi_1158 nicotinate-nucleotide pyrophosphorylase low > 79
Dickeya dadantii 3937 0.49 DDA3937_RS12435 GTP-binding protein 0.37 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase low > 74
Paraburkholderia graminis OAS925 0.45 ABIE53_000293 G3E family GTPase 0.33 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) low > 113
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS29500 GTP-binding protein 0.35 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase low > 153
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS13270 GTP-binding protein 0.41 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS08435 GTP-binding protein 0.41 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase
Bacteroides stercoris CC31F 0.24 HMPREF1181_RS07845 GTP-binding protein 0.38 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase
Escherichia coli Nissle 1917 0.15 ECOLIN_RS05820 GTP-binding protein 0.33 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase
Escherichia fergusonii Becca 0.15 EFB2_02962 Putative metal chaperone YciC 0.33 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] low > 86
Mycobacterium tuberculosis H37Rv 0.11 Rv0106 Conserved hypothetical protein 0.40 Rv1596 Probable nicotinate-nucleotide pyrophosphatase NadC

Not shown: 1 genomes with orthologs for Atu3181 only; 61 genomes with orthologs for Atu4096 only