Conservation of cofitness between Atu0888 and Atu3614 in Agrobacterium fabrum C58

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0888 transcriptional regulator, MerR family 1.0 Atu3614 glyoxalase II 0.22 6
Sinorhizobium meliloti 1021 0.72 SMc00109 transcriptional regulator 0.66 SMc00708 hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein low > 103
Bosea sp. OAE506 0.52 ABIE41_RS05340 helix-turn-helix domain-containing protein 0.35 ABIE41_RS06025 hydroxyacylglutathione hydrolase low > 77
Phaeobacter inhibens DSM 17395 0.50 PGA1_262p00460 transcriptional regulator, MerR family 0.45 PGA1_c25140 hydroxyacylglutathione hydrolase GloB low > 62
Dinoroseobacter shibae DFL-12 0.50 Dshi_3961 transcriptional regulator, MerR family (RefSeq) 0.48 Dshi_2691 Hydroxyacylglutathione hydrolase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS11775 helix-turn-helix domain-containing protein 0.38 A4249_RS00300 hydroxyacylglutathione hydrolase low > 48
Azospirillum sp. SherDot2 0.48 MPMX19_06374 HTH-type transcriptional regulator HmrR 0.47 MPMX19_06029 Hydroxyacylglutathione hydrolase GloB low > 112
Rhizobium sp. OAE497 0.47 ABIE40_RS15545 helix-turn-helix domain-containing protein 0.69 ABIE40_RS17605 hydroxyacylglutathione hydrolase low > 107
Rhodospirillum rubrum S1H 0.45 Rru_A1026 Transcriptional Regulator, MerR family (NCBI) 0.41 Rru_A3270 Hydroxyacylglutathione hydrolase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.45 TX73_016860 helix-turn-helix domain-containing protein 0.48 TX73_003155 hydroxyacylglutathione hydrolase low > 86
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_3027 Predicted transcriptional regulators 0.40 Ga0059261_2759 hydroxyacylglutathione hydrolase low > 68
Marinobacter adhaerens HP15 0.42 HP15_89 transcriptional regulator, MerR family protein 0.28 HP15_1805 hydroxyacylglutathione hydrolase low > 73
Magnetospirillum magneticum AMB-1 0.42 AMB_RS05180 MerR family DNA-binding transcriptional regulator 0.41 AMB_RS21210 hydroxyacylglutathione hydrolase low > 64
Azospirillum brasilense Sp245 0.38 AZOBR_RS27570 MerR family transcriptional regulator 0.47 AZOBR_RS20450 hydroxyacylglutathione hydrolase low > 97
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05540 heavy metal-responsive transcriptional regulator 0.30 OKGIIK_08000 gloB hydroxyacylglutathione hydrolase low > 52
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS01745 heavy metal-responsive transcriptional regulator 0.30 ABZR86_RS07285 hydroxyacylglutathione hydrolase low > 74
Pseudomonas stutzeri RCH2 0.37 Psest_2758 Predicted transcriptional regulators 0.32 Psest_2071 hydroxyacylglutathione hydrolase low > 67
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS01365 heavy metal-responsive transcriptional regulator 0.29 LRK54_RS16765 hydroxyacylglutathione hydrolase low > 59
Rhodanobacter denitrificans MT42 0.36 LRK55_RS01130 MerR family transcriptional regulator 0.29 LRK55_RS16490 hydroxyacylglutathione hydrolase low > 63
Variovorax sp. SCN45 0.36 GFF4030 Transcriptional regulator, MerR family 0.29 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 0.38 47
Dickeya dadantii 3937 0.36 DDA3937_RS02550 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 DDA3937_RS16060 hydroxyacylglutathione hydrolase low > 74
Dickeya dianthicola ME23 0.35 DZA65_RS02685 Cd(II)/Pb(II)-responsive transcriptional regulator 0.26 DZA65_RS17265 hydroxyacylglutathione hydrolase low > 75
Dickeya dianthicola 67-19 0.35 HGI48_RS02580 Cd(II)/Pb(II)-responsive transcriptional regulator 0.26 HGI48_RS16180 hydroxyacylglutathione hydrolase low > 71
Paraburkholderia graminis OAS925 0.34 ABIE53_000366 Cd(II)/Pb(II)-responsive transcriptional regulator 0.27 ABIE53_003007 hydroxyacylglutathione hydrolase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02296 transcriptional regulator, MerR family 0.27 H281DRAFT_04399 hydroxyacylglutathione hydrolase low > 103
Shewanella sp. ANA-3 0.33 Shewana3_4323 MerR family transcriptional regulator (RefSeq) 0.30 Shewana3_2369 beta-lactamase domain-containing protein (RefSeq) low > 73
Escherichia coli ECOR27 0.33 NOLOHH_09300 zntR Zn(2+)-responsive transcriptional regulator 0.29 NOLOHH_02325 gloB hydroxyacylglutathione hydrolase low > 57
Escherichia coli ECRC101 0.33 OKFHMN_17500 zntR Zn(2+)-responsive transcriptional regulator 0.29 OKFHMN_09980 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli Nissle 1917 0.33 ECOLIN_RS18895 Zn(2+)-responsive transcriptional regulator 0.28 ECOLIN_RS01160 hydroxyacylglutathione hydrolase — —
Escherichia coli BW25113 0.33 b3292 zntR zinc-responsive transcriptional regulator (NCBI) 0.29 b0212 gloB predicted hydroxyacylglutathione hydrolase (NCBI) low > 76
Escherichia coli ECOR38 0.33 HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator 0.29 HEPCGN_07920 gloB hydroxyacylglutathione hydrolase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00411 HTH-type transcriptional regulator ZntR 0.29 OHPLBJKB_03449 Hydroxyacylglutathione hydrolase GloB low > 73
Escherichia coli BL21 0.33 ECD_03143 zntA gene transcriptional activator 0.29 ECD_00205 hydroxyacylglutathione hydrolase low > 60
Escherichia coli ECRC101 0.33 MCAODC_08030 zntR Zn(2+)-responsive transcriptional regulator 0.29 MCAODC_00495 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli ECRC98 0.33 JDDGAC_21130 zntR Zn(2+)-responsive transcriptional regulator 0.29 JDDGAC_13575 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli ECRC99 0.33 KEDOAH_10640 zntR Zn(2+)-responsive transcriptional regulator 0.29 KEDOAH_18175 gloB hydroxyacylglutathione hydrolase — —
Escherichia coli ECRC62 0.33 BNILDI_02220 zntR Zn(2+)-responsive transcriptional regulator 0.29 BNILDI_09345 gloB hydroxyacylglutathione hydrolase — —
Escherichia fergusonii Becca 0.33 EFB2_00531 HTH-type transcriptional regulator ZntR 0.29 EFB2_03831 Hydroxyacylglutathione hydrolase GloB low > 86
Escherichia coli ECRC102 0.33 NIAGMN_15270 zntR Zn(2+)-responsive transcriptional regulator 0.29 NIAGMN_07830 gloB hydroxyacylglutathione hydrolase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS22375 Cd(II)/Pb(II)-responsive transcriptional regulator 0.27 ABZR87_RS14165 hydroxyacylglutathione hydrolase low > 80
Ralstonia solanacearum GMI1000 0.32 RS_RS18685 Cd(II)/Pb(II)-responsive transcriptional regulator 0.30 RS_RS07605 hydroxyacylglutathione hydrolase low > 80
Ralstonia solanacearum UW163 0.32 UW163_RS17335 Cd(II)/Pb(II)-responsive transcriptional regulator 0.30 UW163_RS15525 hydroxyacylglutathione hydrolase — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS21850 Cd(II)/Pb(II)-responsive transcriptional regulator 0.30 RALBFv3_RS02215 hydroxyacylglutathione hydrolase low > 76
Rahnella sp. WP5 0.32 EX31_RS16005 Zn(2+)-responsive transcriptional regulator 0.27 EX31_RS21200 hydroxyacylglutathione hydrolase low > 89
Ralstonia solanacearum PSI07 0.32 RPSI07_RS01310 Cd(II)/Pb(II)-responsive transcriptional regulator 0.30 RPSI07_RS15230 hydroxyacylglutathione hydrolase low > 81
Castellaniella sp019104865 MT123 0.30 ABCV34_RS00070 Hg(II)-responsive transcriptional regulator 0.29 ABCV34_RS10485 hydroxyacylglutathione hydrolase low > 48
Alteromonas macleodii MIT1002 0.30 MIT1002_02061 Mercuric resistance operon regulatory protein 0.26 MIT1002_02494 Hydroxyacylglutathione hydrolase low > 70
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1624 Hg(II)-responsive transcriptional regulator 0.30 B158DRAFT_1061 hydroxyacylglutathione hydrolase low > 40
Klebsiella michiganensis M5al 0.29 BWI76_RS25700 heavy metal-responsive transcriptional regulator 0.27 BWI76_RS05440 hydroxyacylglutathione hydrolase low > 92
Pantoea sp. MT58 0.29 IAI47_02260 Zn(2+)-responsive transcriptional regulator 0.28 IAI47_15340 hydroxyacylglutathione hydrolase low > 76
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_01430 Zn(2+)-responsive transcriptional regulator 0.30 CSW01_11395 hydroxyacylglutathione hydrolase low > 62
Erwinia tracheiphila SCR3 0.29 LU632_RS22515 zntR Zn(2+)-responsive transcriptional regulator 0.28 LU632_RS01080 gloB hydroxyacylglutathione hydrolase low > 74
Caulobacter crescentus NA1000 0.21 CCNA_03178 MerR-family transcriptional regulator 0.38 CCNA_00553 hydroxyacylglutathione hydrolase low > 66
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03178 MerR-family transcriptional regulator 0.38 CCNA_00553 hydroxyacylglutathione hydrolase 0.60 42

Not shown: 1 genomes with orthologs for Atu0888 only; 33 genomes with orthologs for Atu3614 only