Conservation of cofitness between Atu1446 and Atu2155 in Agrobacterium fabrum C58

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1446 two component response regulator 1.0 Atu2155 methionine synthase 0.47 12
Rhizobium sp. OAE497 0.95 ABIE40_RS09090 nitrogen regulation protein NR(I) 0.89 ABIE40_RS12135 methionine synthase 0.85 32
Sinorhizobium meliloti 1021 0.93 SMc01043 nitrogen assimilation regulatory protein 0.79 SMc03112 B12-dependent methionine synthase 0.39 46
Rhodopseudomonas palustris CGA009 0.75 TX73_013420 nitrogen regulation protein NR(I) 0.71 TX73_019180 methionine synthase low > 86
Magnetospirillum magneticum AMB-1 0.70 AMB_RS11950 nitrogen regulation protein NR(I) 0.22 AMB_RS02225 methionine synthase — —
Azospirillum sp. SherDot2 0.69 MPMX19_01112 DNA-binding transcriptional regulator NtrC 0.21 MPMX19_00637 Methionine synthase — —
Rhodospirillum rubrum S1H 0.66 Rru_A1678 Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) 0.20 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —
Escherichia coli Nissle 1917 0.42 ECOLIN_RS22295 nitrogen regulation protein NR(I) 0.58 ECOLIN_RS23160 methionine synthase low > 52
Escherichia fergusonii Becca 0.42 EFB2_04748 DNA-binding transcriptional regulator NtrC 0.58 EFB2_04592 Methionine synthase low > 86
Escherichia coli ECRC101 0.42 OKFHMN_14110 glnG nitrogen regulation protein NR(I) 0.58 OKFHMN_13240 metH methionine synthase — —
Escherichia coli ECRC101 0.42 MCAODC_04610 glnG nitrogen regulation protein NR(I) 0.58 MCAODC_03740 metH methionine synthase — —
Escherichia coli ECRC62 0.42 BNILDI_05290 glnG nitrogen regulation protein NR(I) 0.58 BNILDI_06140 metH methionine synthase — —
Escherichia coli ECRC102 0.42 NIAGMN_11865 glnG nitrogen regulation protein NR(I) 0.58 NIAGMN_10990 metH methionine synthase — —
Escherichia coli ECRC99 0.42 KEDOAH_14040 glnG nitrogen regulation protein NR(I) 0.58 KEDOAH_14920 metH methionine synthase — —
Escherichia coli BL21 0.42 ECD_03753 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 0.58 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 60
Escherichia coli ECRC98 0.42 JDDGAC_17735 glnG nitrogen regulation protein NR(I) 0.58 JDDGAC_16865 metH methionine synthase — —
Escherichia coli ECOR27 0.42 NOLOHH_06240 glnG nitrogen regulation protein NR(I) 0.58 NOLOHH_05380 metH methionine synthase low > 57
Escherichia coli BW25113 0.42 b3868 glnG fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) 0.58 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_04597 DNA-binding transcriptional regulator NtrC 0.58 MPMX20_00235 Methionine synthase low > 85
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4350 nitrogen regulation protein NR(I) 0.59 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_04184 DNA-binding transcriptional regulator NtrC 0.58 OHPLBJKB_04030 Methionine synthase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2220 Nitrogen regulation protein NR(I) 0.59 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Escherichia coli ECOR38 0.41 HEPCGN_12740 glnG nitrogen regulation protein NR(I) 0.58 HEPCGN_11885 metH methionine synthase low > 85
Klebsiella michiganensis M5al 0.41 BWI76_RS00385 nitrogen assimilation regulatory protein 0.59 BWI76_RS01685 methionine synthase low > 92
Pantoea sp. MT58 0.41 IAI47_00450 nitrogen regulation protein NR(I) 0.58 IAI47_17990 methionine synthase low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS21440 nitrogen regulation protein NR(I) 0.59 HER17_RS02310 methionine synthase low > 75
Serratia liquefaciens MT49 0.41 IAI46_24960 nitrogen regulation protein NR(I) 0.60 IAI46_23155 methionine synthase low > 86
Acinetobacter radioresistens SK82 0.40 MPMX26_01292 DNA-binding transcriptional regulator NtrC 0.59 MPMX26_02351 Methionine synthase low > 36
Dickeya dianthicola ME23 0.40 DZA65_RS22210 nitrogen regulation protein NR(I) 0.60 DZA65_RS20250 methionine synthase low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS21235 nitrogen regulation protein NR(I) 0.59 HGI48_RS19130 methionine synthase low > 71
Shewanella sp. ANA-3 0.40 Shewana3_0258 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) 0.59 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Dickeya dadantii 3937 0.40 DDA3937_RS00125 nitrogen regulation protein NR(I) 0.60 DDA3937_RS19040 methionine synthase low > 74
Rahnella sp. WP5 0.40 EX31_RS15880 nitrogen regulation protein NR(I) 0.60 EX31_RS11760 methionine synthase low > 89
Shewanella loihica PV-4 0.40 Shew_3561 nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) 0.60 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.40 SO4472 ntrC nitrogen regulation protein NR(I) (NCBI ptt file) 0.59 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.40 HP15_425 two-component response regulator NtrC 0.62 HP15_1792 B12-dependent methionine synthase low > 73
Shewanella amazonensis SB2B 0.40 Sama_3427 response regulator receiver protein (RefSeq) 0.60 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.56 34
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3826 Nitrogen regulation protein NR(I) 0.59 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.52 23
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_09730 nitrogen regulation protein NR(I) 0.59 AO356_00545 methionine synthase low > 104
Pseudomonas simiae WCS417 0.40 PS417_01635 nitrogen regulation protein NR(I) 0.59 PS417_12310 methionine synthase 0.56 53
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS01685 nitrogen regulation protein NR(I) 0.59 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS01685 nitrogen regulation protein NR(I) 0.59 PFLU_RS13000 methionine synthase low > 109
Pseudomonas sp. RS175 0.39 PFR28_04944 DNA-binding transcriptional regulator NtrC 0.60 PFR28_01369 Methionine synthase 0.37 31
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1611 Nitrogen regulation protein NR(I) 0.59 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) 0.59 Psyr_2464 methionine synthase (B12-dependent) — —
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) 0.59 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_12145 nitrogen regulation protein NR(I) 0.59 AO353_21615 methionine synthase low > 101
Pseudomonas sp. S08-1 0.39 OH686_10640 nitrogen regulation protein NR(I) 0.60 OH686_03335 methionine synthase low > 80
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_347 Nitrogen regulation protein NR(I) 0.59 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas putida KT2440 0.39 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG 0.60 PP_2375 cobalamin-dependent methionine synthase low > 96
Pseudomonas stutzeri RCH2 0.39 Psest_3932 nitrogen regulation protein NR(I) 0.61 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15680 chemotaxis protein CheY 0.58 HSERO_RS21740 methionine synthase low > 78
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_13865 nitrogen regulation protein NR(I) 0.58 CSW01_02060 methionine synthase low > 62
Dechlorosoma suillum PS 0.38 Dsui_1051 nitrogen regulation protein NR(I) 0.57 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS03540 nitrogen regulation protein NR(I) 0.55 ABCV34_RS14560 methionine synthase low > 48
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS14380 sigma-54 dependent transcriptional regulator 0.48 HMPREF1078_RS14955 methionine synthase low > 61
Fusobacterium nucleatum SB010 0.23 HUW76_02090 sigma-54-dependent Fis family transcriptional regulator 0.28 HUW76_02290 homocysteine S-methyltransferase family protein low > 35

Not shown: 35 genomes with orthologs for Atu1446 only; 6 genomes with orthologs for Atu2155 only