Conservation of cofitness between Atu1688 and Atu2015 in Agrobacterium fabrum C58

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu2015 aminotransferase 0.85 18
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.80 ABIE40_RS11345 PLP-dependent aminotransferase family protein — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.78 SMc04323 aminotransferase low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.29 Psyr_1841 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0756 indole-3-glycerol phosphate synthase 0.29 Psyr_1841 Aminotransferase, class I and II low > 86
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.23 ABIE41_RS13895 PLP-dependent aminotransferase family protein — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.49 MPMX19_01777 2-aminoadipate transaminase 0.59 64
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.53 CCNA_02244 aminotransferase class I family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.53 CCNA_02244 aminotransferase class I family protein low > 67
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.50 AZOBR_RS06555 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 97
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.37 Xcc-8004.2917.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 74
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.34 RR42_RS14595 2-aminoadipate aminotransferase low > 128
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.53 Rru_A3004 Aminotransferase, class I and II (NCBI) low > 58
Pseudomonas simiae WCS417 0.48 PS417_25710 indole-3-glycerol-phosphate synthase 0.29 PS417_19385 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.27 AO353_02295 GntR family transcriptional regulator low > 101
Pseudomonas stutzeri RCH2 0.47 Psest_3647 Indole-3-glycerol phosphate synthase 0.28 Psest_1990 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 67
Ralstonia solanacearum GMI1000 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.37 RS_RS04875 PLP-dependent aminotransferase family protein — —
Pseudomonas sp. S08-1 0.47 OH686_15140 Indole-3-glycerol phosphate synthase 0.29 OH686_00615 Aspartate aminotransferase (AspB-4) low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.37 RPSI07_RS19365 PLP-dependent aminotransferase family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.30 GFF1752 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 90
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.27 Pf1N1B4_3771 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.37 ABZR87_RS09815 PLP-dependent aminotransferase family protein low > 80
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.26 PfGW456L13_4175 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Acidovorax sp. GW101-3H11 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.30 Ac3H11_1358 L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) (from data) low > 79
Variovorax sp. OAS795 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.30 ABID97_RS17310 PLP-dependent aminotransferase family protein low > 91
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.26 Pf6N2E2_5813 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.26 AO356_19495 GntR family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase 0.26 PFR28_03135 2-aminoadipate transaminase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.37 RALBFv3_RS14095 PLP-dependent aminotransferase family protein — —
Ralstonia solanacearum UW163 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.37 UW163_RS15715 PLP-dependent aminotransferase family protein — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.38 ABCV34_RS13175 PLP-dependent aminotransferase family protein — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.37 HSERO_RS09050 2-aminoadipate aminotransferase 0.46 61
Variovorax sp. SCN45 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.34 GFF1574 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.38 QEN71_RS24660 PLP-dependent aminotransferase family protein low > 153
Paraburkholderia graminis OAS925 0.43 ABIE53_003643 indole-3-glycerol phosphate synthase 0.38 ABIE53_001399 2-aminoadipate transaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.37 H281DRAFT_00271 2-aminoadipate transaminase low > 103
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.37 BPHYT_RS05965 2-aminoadipate aminotransferase low > 109
Bacteroides ovatus ATCC 8483 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase 0.37 BACOVA_03037 aminotransferase, class I/II low > 94
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.37 MMP_RS00540 PLP-dependent aminotransferase family protein — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.37 MMJJ_RS04945 PLP-dependent aminotransferase family protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.30 DVU2364 aminotransferase, classes I and II (TIGR) low > 55

Not shown: 25 genomes with orthologs for Atu1688 only; 11 genomes with orthologs for Atu2015 only