Conservation of cofitness between Atu0298 and Atu1140 in Agrobacterium fabrum C58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0298 orotidine 5 1.0 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.90 11
Rhizobium sp. OAE497 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.66 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase — —
Sinorhizobium meliloti 1021 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.65 SMc00614 phosphoribosylglycinamide formyltransferase 0.89 12
Rhodopseudomonas palustris CGA009 0.51 TX73_001750 orotidine-5'-phosphate decarboxylase 0.40 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14665 orotidine-5'-phosphate decarboxylase 0.35 A4249_RS08220 phosphoribosylglycinamide formyltransferase — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.40 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.81 24
Alteromonas macleodii MIT1002 0.36 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.39 MIT1002_02220 Phosphoribosylglycinamide formyltransferase low > 70
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.38 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.42 CSW01_11355 phosphoribosylglycinamide formyltransferase low > 62
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.38 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Marinobacter adhaerens HP15 0.32 HP15_1370 orotidine 5'-phosphate decarboxylase 0.39 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Shewanella sp. ANA-3 0.32 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.38 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.31 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.39 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 76
Dinoroseobacter shibae DFL-12 0.31 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.40 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.83 13
Dickeya dadantii 3937 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.39 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.72 51
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.39 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase 0.43 AO353_02685 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase — —
Dickeya dianthicola 67-19 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.40 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Pantoea sp. MT58 0.30 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.40 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.66 76
Shewanella loihica PV-4 0.30 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) 0.39 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Escherichia coli ECRC62 0.30 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.40 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Dickeya dianthicola ME23 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.40 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Erwinia tracheiphila SCR3 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.40 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Escherichia coli ECOR27 0.30 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.40 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.40 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia coli BL21 0.30 ECD_01258 orotidine-5'-phosphate decarboxylase 0.40 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Pseudomonas putida KT2440 0.30 PP_1815 Orotidine 5'-phosphate decarboxylase 0.43 PP_1664 phosphoribosylglycinamide formyltransferase 1 — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.39 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Escherichia coli BW25113 0.30 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.40 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.72 68
Acinetobacter radioresistens SK82 0.30 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.36 MPMX26_02207 Phosphoribosylglycinamide formyltransferase low > 36
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.42 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Escherichia fergusonii Becca 0.29 EFB2_02644 Orotidine 5'-phosphate decarboxylase 0.40 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas sp. RS175 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.42 PFR28_03218 Phosphoribosylglycinamide formyltransferase — —
Klebsiella michiganensis M5al 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.39 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Pseudomonas simiae WCS417 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase 0.45 PS417_20125 phosphoribosylglycinamide formyltransferase — —
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.40 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Rhodospirillum rubrum S1H 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) — —
Escherichia coli ECOR38 0.29 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.40 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli ECRC101 0.29 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.40 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.29 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.40 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC98 0.29 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase 0.40 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC99 0.29 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase 0.40 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC102 0.29 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.40 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Azospirillum brasilense Sp245 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase 0.47 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase low > 97
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.42 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Rahnella sp. WP5 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.44 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase 0.43 AO356_19085 phosphoribosylglycinamide formyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.31 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas stutzeri RCH2 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.39 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Enterobacter sp. TBS_079 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.40 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli Nissle 1917 0.28 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase 0.40 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase — —
Serratia liquefaciens MT49 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.39 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.70 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.41 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Magnetospirillum magneticum AMB-1 0.26 AMB_RS20255 orotidine-5'-phosphate decarboxylase 0.43 AMB_RS14335 phosphoribosylglycinamide formyltransferase — —
Azospirillum sp. SherDot2 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase 0.45 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —

Not shown: 9 genomes with orthologs for Atu0298 only; 24 genomes with orthologs for Atu1140 only