Conservation of cofitness between Atu1140 and Atu0298 in Agrobacterium fabrum C58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 1.0 Atu0298 orotidine 5 0.90 15
Rhizobium sp. OAE497 0.66 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase — —
Sinorhizobium meliloti 1021 0.65 SMc00614 phosphoribosylglycinamide formyltransferase 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.89 50
Rhodospirillum rubrum S1H 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) — —
Azospirillum brasilense Sp245 0.47 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_01305 Phosphoribosylglycinamide formyltransferase 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Pseudomonas simiae WCS417 0.45 PS417_20125 phosphoribosylglycinamide formyltransferase 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase — —
Rahnella sp. WP5 0.44 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase low > 89
Pseudomonas putida KT2440 0.43 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.30 PP_1815 Orotidine 5'-phosphate decarboxylase — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS14335 phosphoribosylglycinamide formyltransferase 0.26 AMB_RS20255 orotidine-5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19085 phosphoribosylglycinamide formyltransferase 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_02685 phosphoribosylglycinamide formyltransferase 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.33 CSW01_09560 orotidine-5'-phosphate decarboxylase low > 62
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.29 Pf1N1B4_514 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Pseudomonas sp. RS175 0.42 PFR28_03218 Phosphoribosylglycinamide formyltransferase 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.27 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 low > 78
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.28 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase 0.30 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 low > 73
Escherichia coli BL21 0.40 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.30 ECD_01258 orotidine-5'-phosphate decarboxylase low > 60
Escherichia coli ECOR27 0.40 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.30 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase low > 57
Escherichia fergusonii Becca 0.40 EFB2_01398 Phosphoribosylglycinamide formyltransferase 0.29 EFB2_02644 Orotidine 5'-phosphate decarboxylase low > 86
Escherichia coli ECRC62 0.40 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase 0.30 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECOR38 0.40 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase 0.29 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase low > 85
Escherichia coli ECRC99 0.40 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase 0.29 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase — —
Enterobacter sp. TBS_079 0.40 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.40 20
Escherichia coli BW25113 0.40 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.30 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.72 13
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.31 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.83 8
Dickeya dianthicola 67-19 0.40 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase low > 71
Phaeobacter inhibens DSM 17395 0.40 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.36 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.81 22
Dickeya dianthicola ME23 0.40 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase low > 75
Rhodopseudomonas palustris CGA009 0.40 TX73_015790 phosphoribosylglycinamide formyltransferase 0.51 TX73_001750 orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC101 0.40 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.29 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC102 0.40 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.29 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase — —
Pantoea sp. MT58 0.40 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.30 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.66 5
Escherichia coli ECRC101 0.40 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase 0.29 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase — —
Escherichia coli ECRC98 0.40 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase 0.29 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase — —
Erwinia tracheiphila SCR3 0.40 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase low > 74
Dickeya dadantii 3937 0.39 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.72 1
Shewanella loihica PV-4 0.39 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.30 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.39 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 — —
Pectobacterium carotovorum WPP14 0.39 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase low > 75
Alteromonas macleodii MIT1002 0.39 MIT1002_02220 Phosphoribosylglycinamide formyltransferase 0.36 MIT1002_02184 Orotidine 5'-phosphate decarboxylase low > 70
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —
Serratia liquefaciens MT49 0.39 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.70 46
Shewanella oneidensis MR-1 0.39 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.31 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.74 13
Klebsiella michiganensis M5al 0.39 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.36 19
Marinobacter adhaerens HP15 0.39 HP15_1298 phosphoribosylglycinamide formyltransferase 0.32 HP15_1370 orotidine 5'-phosphate decarboxylase — —
Shewanella sp. ANA-3 0.38 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.32 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.76 41
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.32 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.35 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) — —
Caulobacter crescentus NA1000 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.75 21
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase low > 67
Acinetobacter radioresistens SK82 0.36 MPMX26_02207 Phosphoribosylglycinamide formyltransferase 0.30 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.60 29
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS08220 phosphoribosylglycinamide formyltransferase 0.37 A4249_RS14665 orotidine-5'-phosphate decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) — —

Not shown: 24 genomes with orthologs for Atu1140 only; 9 genomes with orthologs for Atu0298 only