| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_22890 | | secretion protein HlyD | 1.0 | AO353_20200 | | peptidylprolyl isomerase | 0.32 | 17 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_3267 | | RND transporter, membrane fusion protein | 0.91 | PfGW456L13_2556 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.82 | Pf1N1B4_4664 | | RND transporter, membrane fusion protein | 0.91 | Pf1N1B4_3949 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.81 | AO356_25870 | | secretion protein HlyD | 0.91 | AO356_01725 | | peptidylprolyl isomerase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.81 | Pf6N2E2_1273 | | Probable RND efflux membrane fusion protein | 0.91 | Pf6N2E2_2214 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas sp. RS175 | 0.80 | PFR28_02195 | | Multidrug resistance protein MdtA | 0.91 | PFR28_01231 | | Peptidyl-prolyl cis-trans isomerase D | low | > 88 |
| Pseudomonas simiae WCS417 | 0.79 | PS417_12740 | | secretion protein HlyD | 0.87 | PS417_17215 | | peptidylprolyl isomerase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.88 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.88 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.65 | Psyr_2482 | | Secretion protein HlyD | 0.78 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.65 | Psyr_2482 | | Secretion protein HlyD | 0.78 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas putida KT2440 | 0.61 | PP_3585 | | multidrug efflux transport system - putative membrane fusion protein | 0.78 | PP_2304 | | putative Peptidyl-prolyl cis-trans isomerase D | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_2138 | | RND family efflux transporter, MFP subunit | 0.65 | Psest_2283 | | Parvulin-like peptidyl-prolyl isomerase | — | — |
| Pseudomonas sp. S08-1 | 0.51 | OH686_00920 | | Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA | 0.67 | OH686_03625 | | Peptidyl-prolyl cis-trans isomerase PpiD | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS05510 | | multidrug transporter subunit MdtA | 0.18 | RPSI07_RS16155 | | peptidylprolyl isomerase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS18125 | | multidrug transporter subunit MdtA | 0.19 | RALBFv3_RS01320 | | peptidylprolyl isomerase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS21005 | | multidrug transporter subunit MdtA | 0.19 | UW163_RS14630 | | peptidylprolyl isomerase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS19030 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.18 | ABZR87_RS12765 | | SurA N-terminal domain-containing protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS22910 | | multidrug transporter subunit MdtA | 0.19 | RS_RS08675 | | peptidyl-prolyl cis-trans isomerase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS23300 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | QEN71_RS21955 | | SurA N-terminal domain-containing protein | low | > 153 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_0484 | | RND family efflux transporter, MFP subunit | 0.18 | EX28DRAFT_2529 | | Parvulin-like peptidyl-prolyl isomerase | low | > 76 |
| Pantoea sp. MT58 | 0.40 | IAI47_06875 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | IAI47_14635 | | peptidylprolyl isomerase | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_01630 | | Multidrug resistance protein MdtA | 0.20 | OHPLBJKB_03232 | | Peptidyl-prolyl cis-trans isomerase D | low | > 73 |
| Escherichia coli BW25113 | 0.40 | b2074 | b2074 | putative membrane protein (VIMSS) | 0.20 | b0441 | ppiD | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_14460 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | BNILDI_22660 | ppiD | peptidylprolyl isomerase | low | > 75 |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_24200 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | OKFHMN_08310 | ppiD | peptidylprolyl isomerase | low | > 80 |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_03950 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | KEDOAH_19655 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli BL21 | 0.40 | ECD_01979 | | multidrug efflux system, subunit A | 0.20 | ECD_00393 | | periplasmic folding chaperone, has an inactive PPIase domain | low | > 61 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_06493 | | membrane fusion protein, multidrug efflux system | 0.17 | H281DRAFT_00902 | | peptidyl-prolyl cis-trans isomerase D | low | > 103 |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_22145 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | NIAGMN_06365 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_28310 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | JDDGAC_11965 | ppiD | peptidylprolyl isomerase | low | > 86 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_20740 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | MCAODC_27535 | ppiD | peptidylprolyl isomerase | 0.47 | 62 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_02890 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | HEPCGN_06925 | ppiD | peptidylprolyl isomerase | low | > 87 |
| Enterobacter sp. TBS_079 | 0.39 | MPMX20_03060 | | Multidrug resistance protein MdtA | 0.18 | MPMX20_01032 | | Peptidyl-prolyl cis-trans isomerase D | low | > 85 |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_15545 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.20 | NOLOHH_01245 | ppiD | peptidylprolyl isomerase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS12195 | | multidrug efflux RND transporter subunit MdtA | 0.20 | ECOLIN_RS02645 | | peptidylprolyl isomerase | low | > 55 |
| Escherichia fergusonii Becca | 0.39 | EFB2_01781 | | Multidrug resistance protein MdtA | 0.20 | EFB2_03616 | | Peptidyl-prolyl cis-trans isomerase D | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS07790 | | RND transporter MFP subunit | 0.16 | BPHYT_RS09480 | | peptidyl-prolyl cis-trans isomerase | low | > 109 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS19250 | | multidrug transporter subunit MdtA | 0.18 | BWI76_RS06545 | | peptidylprolyl isomerase | low | > 92 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS03315 | | RND transporter MFP subunit | 0.16 | RR42_RS09045 | | peptidylprolyl isomerase | low | > 128 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF3855 | | Multidrug transporter MdtA | 0.17 | GFF4357 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 78 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS15340 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.18 | HGI48_RS05705 | | peptidylprolyl isomerase | low | > 71 |
| Dickeya dadantii 3937 | 0.38 | DDA3937_RS15260 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | DDA3937_RS05660 | | peptidylprolyl isomerase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.37 | HER17_RS06325 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | HER17_RS15830 | | peptidylprolyl isomerase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.37 | LU632_RS08695 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.16 | LU632_RS18325 | ppiD | peptidylprolyl isomerase | low | > 74 |
| Rahnella sp. WP5 | 0.36 | EX31_RS13385 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.17 | EX31_RS22265 | | peptidylprolyl isomerase | low | > 89 |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS16160 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.18 | DZA65_RS06030 | | peptidylprolyl isomerase | low | > 75 |
| Serratia liquefaciens MT49 | 0.36 | IAI46_18970 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.16 | IAI46_05030 | | peptidylprolyl isomerase | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.35 | ABCV34_RS14615 | | efflux RND transporter periplasmic adaptor subunit | 0.14 | ABCV34_RS03085 | | SurA N-terminal domain-containing protein | — | — |
| Variovorax sp. SCN45 | 0.34 | GFF6660 | | Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA | 0.17 | GFF2852 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 127 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS20860 | | efflux RND transporter periplasmic adaptor subunit | 0.16 | ABID97_RS10675 | | SurA N-terminal domain-containing protein | low | > 91 |
| Rhodopseudomonas palustris CGA009 | 0.32 | TX73_013305 | | efflux RND transporter periplasmic adaptor subunit | 0.11 | TX73_014975 | | SurA N-terminal domain-containing protein | low | > 86 |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_05478 | | Multidrug resistance protein MdtA | 0.08 | MPMX19_00894 | | Peptidyl-prolyl cis-trans isomerase D | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.4791.1 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.19 | Xcc-8004.4039.1 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS16315 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | ABZR86_RS07300 | | SurA N-terminal domain-containing protein | 0.35 | 71 |
| Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_16100 | | HlyD-D23 domain-containing protein | 0.21 | OKGIIK_08010 | | Peptidylprolyl isomerase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.26 | LRK55_RS09500 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | LRK55_RS16480 | | SurA N-terminal domain-containing protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.26 | LRK54_RS09840 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | LRK54_RS16755 | | SurA N-terminal domain-containing protein | low | > 59 |
| Bosea sp. OAE506 | 0.21 | ABIE41_RS20145 | | efflux RND transporter periplasmic adaptor subunit | 0.08 | ABIE41_RS15735 | | SurA N-terminal domain-containing protein | low | > 77 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU0437 | | efflux transporter, RND family, MFP subunit (TIGR) | 0.13 | DVU1065 | | peptidyl-prolyl cis-trans isomerse domain protein (TIGR) | low | > 55 |
Not shown: 2 genomes with orthologs for AO353_22890 only; 18 genomes with orthologs for AO353_20200 only