Conservation of cofitness between AO353_16875 and AO353_11075 in Pseudomonas fluorescens FW300-N2E3

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 1.0 AO353_11075 acetyl-CoA hydrolase 0.31 16
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.96 PfGW456L13_559 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.98 Pf1N1B4_1821 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 87
Pseudomonas sp. RS175 0.97 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.95 PFR28_04722 Succinyl-CoA:coenzyme A transferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.95 AO356_10875 acetyl-CoA hydrolase low > 104
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.96 Pf6N2E2_4041 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 103
Pseudomonas fluorescens SBW25 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.94 PFLU_RS00540 acetyl-CoA hydrolase/transferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.94 PFLU_RS00540 acetyl-CoA hydrolase/transferase family protein low > 109
Pseudomonas simiae WCS417 0.96 PS417_05880 ribosomal protein S12 methylthiotransferase 0.94 PS417_00555 acetyl-CoA hydrolase low > 88
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.84 Psyr_5019 Acetyl-CoA hydrolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.84 Psyr_5019 Acetyl-CoA hydrolase low > 86
Pseudomonas putida KT2440 0.89 PP_1197 ribosomal protein S12 methylthiotransferase 0.92 PP_0154 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) 0.13 82
Pseudomonas stutzeri RCH2 0.83 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.79 Psest_1508 succinate CoA transferases low > 67
Castellaniella sp019104865 MT123 0.77 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO 0.63 ABCV34_RS09905 succinate CoA transferase low > 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.42 OHPLBJKB_00796 Propionyl-CoA:succinate CoA transferase low > 73
Escherichia coli ECRC102 0.72 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 NIAGMN_17195 scpC propionyl-CoA:succinate CoA transferase — —
Escherichia coli ECOR38 0.72 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 HEPCGN_18730 scpC propionyl-CoA:succinate CoA transferase low > 87
Escherichia coli ECRC99 0.72 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 KEDOAH_08710 scpC propionyl-CoA:succinate CoA transferase — —
Escherichia coli BL21 0.72 ECD_00802 ribosomal protein S12 methylthiotransferase 0.42 ECD_02751 propionyl-CoA:succinate CoA transferase low > 61
Escherichia coli ECOR27 0.72 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 NOLOHH_11335 scpC propionyl-CoA:succinate CoA transferase low > 75
Escherichia coli BW25113 0.72 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.42 b2920 ygfH propionyl-CoA:succinate-CoA transferase (NCBI) low > 76
Escherichia coli ECRC101 0.72 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 MCAODC_09950 scpC propionyl-CoA:succinate CoA transferase low > 87
Escherichia coli ECRC100 0.72 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.42 OKFHMN_19430 scpC propionyl-CoA:succinate CoA transferase low > 80
Klebsiella michiganensis M5al 0.72 BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO 0.41 BWI76_RS23950 succinate CoA transferase low > 92
Azospirillum brasilense Sp245 0.70 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase 0.69 AZOBR_RS24070 acetyl-CoA hydrolase low > 97
Azospirillum sp. SherDot2 0.70 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO 0.70 MPMX19_05657 Succinyl-CoA:coenzyme A transferase low > 112
Rhodospirillum rubrum S1H 0.69 Rru_A2811 hypothetical protein (NCBI) 0.73 Rru_A1927 Acetyl-CoA hydrolase (NCBI) low > 58
Acinetobacter radioresistens SK82 0.69 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO 0.80 MPMX26_02840 Succinyl-CoA:coenzyme A transferase 0.70 21
Magnetospirillum magneticum AMB-1 0.66 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO 0.68 AMB_RS07000 acetyl-CoA hydrolase low > 64
Lysobacter sp. OAE881 0.65 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO 0.49 ABIE51_RS00895 acetyl-CoA hydrolase/transferase family protein low > 62
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 0.67 ABZR87_RS12170 acetyl-CoA hydrolase/transferase family protein low > 80
Dechlorosoma suillum PS 0.65 Dsui_2540 ribosomal protein S12 methylthiotransferase RimO 0.49 Dsui_0799 succinate CoA transferase low > 51
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO 0.45 LRK54_RS16545 acetyl-CoA hydrolase/transferase family protein low > 59
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO 0.45 LRK55_RS16270 acetyl-CoA hydrolase/transferase family protein low > 63
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.69 BPHYT_RS23830 acetyl-CoA hydrolase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.46 OKGIIK_08240 aCH1 propionyl-CoA--succinate CoA transferase low > 52
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.70 QEN71_RS07615 acetyl-CoA hydrolase/transferase family protein low > 153
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS07640 ribosomal protein S12 methylthiotransferase 0.68 RR42_RS07275 acetyl-CoA hydrolase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.69 H281DRAFT_05262 succinyl-CoA:acetate CoA-transferase low > 103
Rhodopseudomonas palustris CGA009 0.63 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO 0.48 TX73_002780 acetyl-CoA hydrolase/transferase family protein low > 86
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.66 HSERO_RS00195 acetyl-CoA hydrolase low > 78
Acidovorax sp. GW101-3H11 0.60 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.49 Ac3H11_4892 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 79
Bacteroides ovatus ATCC 8483 0.30 BACOVA_00737 ribosomal protein S12 methylthiotransferase RimO 0.42 BACOVA_02893 succinate CoA transferase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.30 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) 0.42 BT3193 putative coenzyme A transferase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO 0.42 HMPREF1058_RS11270 acetyl-CoA hydrolase/transferase family protein low > 67
Phocaeicola dorei CL03T12C01 0.29 ABI39_RS17125 30S ribosomal protein S12 methylthiotransferase RimO 0.41 ABI39_RS05660 acetyl-CoA hydrolase/transferase family protein low > 72
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01815 30S ribosomal protein S12 methylthiotransferase RimO 0.43 HMPREF1078_RS17145 acetyl-CoA hydrolase/transferase family protein low > 61
Bacteroides stercoris CC31F 0.28 HMPREF1181_RS16335 30S ribosomal protein S12 methylthiotransferase RimO 0.42 HMPREF1181_RS01780 acetyl-CoA hydrolase/transferase family protein low > 56

Not shown: 40 genomes with orthologs for AO353_16875 only; 4 genomes with orthologs for AO353_11075 only