| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS01035 | | histidine utilization repressor | 1.0 | ABZR87_RS06400 | | response regulator transcription factor | 0.72 | 2 |
| Ralstonia solanacearum PSI07 | 0.90 | RPSI07_RS11905 | | histidine utilization repressor | 0.99 | RPSI07_RS22720 | | DNA-binding response regulator | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.89 | RS_RS13260 | | histidine utilization repressor | 0.99 | RS_RS01435 | | DNA-binding response regulator | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.89 | RALBFv3_RS05400 | | histidine utilization repressor | 1.00 | RALBFv3_RS10600 | | DNA-binding response regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.89 | UW163_RS08225 | | histidine utilization repressor | 1.00 | UW163_RS02980 | | DNA-binding response regulator | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.69 | GFF3591 | | Histidine utilization repressor | 0.62 | GFF2789 | | DNA-binding response regulator, LuxR family | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS23510 | | histidine utilization repressor | 0.63 | QEN71_RS05525 | | response regulator transcription factor | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS07560 | | histidine utilization repressor | 0.64 | BPHYT_RS13150 | | hisitidine kinase | — | — |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_001730 | | GntR family histidine utilization transcriptional repressor | 0.46 | ABIE53_000448 | | two-component system invasion response regulator UvrY | low | > 113 |
| Pantoea sp. MT58 | 0.49 | IAI47_13270 | | histidine utilization repressor | 0.38 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 76 |
| Klebsiella michiganensis M5al | 0.48 | BWI76_RS08730 | | histidine utilization repressor | 0.38 | BWI76_RS18335 | | DNA-binding response regulator | low | > 92 |
| Dickeya dianthicola ME23 | 0.48 | DZA65_RS15850 | | histidine utilization repressor | 0.39 | DZA65_RS12190 | | response regulator transcription factor | low | > 75 |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS15100 | | histidine utilization repressor | 0.39 | HGI48_RS11705 | | response regulator | low | > 71 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_10615 | | histidine utilization repressor | 0.39 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF665 | | Histidine utilization repressor | 0.39 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 78 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_04937 | | Mannosyl-D-glycerate transport/metabolism system repressor MngR | 0.29 | MPMX19_03688 | | Response regulator UvrY | low | > 112 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS15020 | | histidine utilization repressor | 0.38 | DDA3937_RS11645 | | response regulator transcription factor | low | > 74 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_2221 | | histidine utilization repressor, proteobacterial | 0.38 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_01398 | | HTH-type transcriptional repressor NagR | 0.38 | MPMX20_02839 | | Response regulator UvrY | low | > 85 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_01710 | | histidine utilization repressor | 0.41 | PS417_25765 | | transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_12240 | | histidine utilization repressor | 0.40 | AO353_07270 | | transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS01765 | | histidine utilization repressor | 0.41 | PFLU_RS27420 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_09640 | | histidine utilization repressor | 0.43 | AO356_29835 | | LuxR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS01765 | | histidine utilization repressor | 0.41 | PFLU_RS27420 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_329 | | Histidine utilization repressor | 0.43 | PfGW456L13_3685 | | DNA-binding response regulator, LuxR family | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS07330 | | histidine utilization repressor | 0.89 | RR42_RS00785 | | LuxR family transcriptional regulator | low | > 128 |
| Pseudomonas putida KT2440 | 0.45 | PP_5035 | | Histidine utilization repressor | 0.40 | PP_0410 | | DNA-binding response regulator UhpA | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1590 | | Histidine utilization repressor | 0.40 | Pf1N1B4_2537 | | DNA-binding response regulator, LuxR family, near polyamine transporter | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_3807 | | Histidine utilization repressor | 0.42 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_0366 | | transcriptional regulator, GntR family | 0.42 | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_0366 | | transcriptional regulator, GntR family | 0.42 | Psyr_4618 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Pseudomonas sp. RS175 | 0.44 | PFR28_04963 | | HTH-type transcriptional repressor NagR | 0.43 | PFR28_01435 | | Response regulator UvrY | low | > 88 |
| Rahnella sp. WP5 | 0.44 | EX31_RS16675 | | histidine utilization repressor | 0.40 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.44 | SMc00674 | | histidine utilization repressor transcription regulator protein | 0.22 | SM_b20468 | | sensory transduction DNA-binding response regulator protein | low | > 103 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_0099 | | histidine utilization repressor (RefSeq) | 0.39 | Shewana3_1608 | | response regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.42 | SO0096 | hutC | histidine utilization repressor (NCBI ptt file) | 0.38 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_2559 | | Histidine utilization repressor | 0.60 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | — | — |
| Shewanella amazonensis SB2B | 0.41 | Sama_0081 | | histidine utilization repressor (RefSeq) | 0.37 | Sama_1607 | | response regulator (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.41 | CSW01_06100 | | histidine utilization repressor | 0.42 | CSW01_06135 | | two-component system response regulator UvrY | — | — |
| Variovorax sp. OAS795 | 0.41 | ABID97_RS03415 | | histidine utilization repressor | 0.61 | ABID97_RS07360 | | response regulator transcription factor | low | > 91 |
| Shewanella loihica PV-4 | 0.40 | Shew_3758 | | histidine utilization repressor (RefSeq) | 0.38 | Shew_1824 | | response regulator (RefSeq) | — | — |
| Variovorax sp. SCN45 | 0.39 | GFF6410 | | Histidine utilization repressor | 0.61 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | 0.61 | 121 |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_00903 | | putative HTH-type transcriptional regulator YurK | 0.35 | MIT1002_02154 | | Response regulator UvrY | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.37 | B158DRAFT_1434 | | histidine utilization repressor, proteobacterial | 0.37 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | low | > 40 |
| Pseudomonas sp. S08-1 | 0.36 | OH686_16760 | | histidine utilization repressor | 0.41 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | low | > 80 |
| Caulobacter crescentus NA1000 Δfur | 0.23 | CCNA_01013 | | histidine utilization repressor | 0.23 | CCNA_01208 | | two-component response regulator | low | > 67 |
| Caulobacter crescentus NA1000 | 0.23 | CCNA_01013 | | histidine utilization repressor | 0.23 | CCNA_01208 | | two-component response regulator | low | > 66 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.18 | Xcc-8004.3293.1 | | Histidine utilization repressor | 0.29 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 74 |
Not shown: 8 genomes with orthologs for ABZR87_RS01035 only; 35 genomes with orthologs for ABZR87_RS06400 only