Conservation of cofitness between ABZR87_RS04785 and ABZR87_RS00935 in Ralstonia sp. UNC404CL21Col

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 1.0 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.61 19
Ralstonia solanacearum PSI07 0.97 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.84 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB low > 81
Ralstonia solanacearum IBSBF1503 0.97 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.83 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB low > 76
Ralstonia solanacearum GMI1000 0.96 RS_RS00555 phosphomethylpyrimidine synthase 0.83 RS_RS13165 polynucleotide adenylyltransferase PcnB low > 80
Cupriavidus basilensis FW507-4G11 0.90 RR42_RS01290 thiamine biosynthesis protein ThiC 0.68 RR42_RS17235 poly(A) polymerase low > 128
Pseudomonas putida KT2440 0.73 PP_4922 Phosphomethylpyrimidine synthase 0.36 PP_4697 poly(A) polymerase low > 96
Pseudomonas stutzeri RCH2 0.73 Psest_0477 thiamine biosynthesis protein ThiC 0.35 Psest_0998 poly(A) polymerase low > 67
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_08810 thiamine biosynthesis protein ThiC 0.37 AO356_16070 poly(A) polymerase low > 104
Pseudomonas sp. RS175 0.72 PFR28_05091 Phosphomethylpyrimidine synthase 0.36 PFR28_03719 Poly(A) polymerase I low > 88
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.37 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) low > 103
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.37 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) low > 87
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.36 PFLU_RS25740 polynucleotide adenylyltransferase PcnB low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0544 hydroxymethylpyrimidine synthase 0.37 Psyr_0830 Poly(A) polymerase low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0544 hydroxymethylpyrimidine synthase 0.37 Psyr_0830 Poly(A) polymerase low > 86
Pseudomonas fluorescens SBW25 0.72 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.36 PFLU_RS25740 polynucleotide adenylyltransferase PcnB low > 109
Marinobacter adhaerens HP15 0.72 HP15_453 thiamine biosynthesis protein thiC 0.38 HP15_326 polyA polymerase 0.63 61
Pseudomonas simiae WCS417 0.72 PS417_02355 thiamine biosynthesis protein ThiC 0.37 PS417_23900 poly(A) polymerase low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_13010 thiamine biosynthesis protein ThiC 0.37 AO353_14395 poly(A) polymerase low > 101
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.37 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) low > 87
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.50 HSERO_RS03145 poly(A) polymerase low > 78
Dechlorosoma suillum PS 0.71 Dsui_0422 thiamine biosynthesis protein ThiC 0.47 Dsui_1515 poly(A) polymerase — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.56 QEN71_RS26465 polynucleotide adenylyltransferase PcnB low > 153
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.55 H281DRAFT_04706 poly(A) polymerase low > 103
Pectobacterium carotovorum WPP14 0.70 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.33 HER17_RS05570 polynucleotide adenylyltransferase PcnB low > 75
Castellaniella sp019104865 MT123 0.70 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.43 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB low > 48
Paraburkholderia graminis OAS925 0.70 ABIE53_002857 phosphomethylpyrimidine synthase 0.54 ABIE53_000870 poly(A) polymerase low > 113
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS13220 phosphomethylpyrimidine synthase 0.55 BPHYT_RS03620 poly(A) polymerase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1066.1 hypothetical protein 0.31 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) low > 74
Serratia liquefaciens MT49 0.69 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.32 IAI46_21220 polynucleotide adenylyltransferase PcnB low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.34 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB low > 74
Escherichia coli ECOR27 0.68 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.32 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.32 OHPLBJKB_03519 Poly(A) polymerase I low > 73
Escherichia coli ECRC62 0.68 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.32 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB low > 75
Escherichia coli Nissle 1917 0.68 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.32 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB low > 55
Dickeya dianthicola 67-19 0.68 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.33 HGI48_RS16060 polynucleotide adenylyltransferase PcnB low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.33 DZA65_RS17145 polynucleotide adenylyltransferase PcnB low > 75
Escherichia coli BW25113 0.68 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.32 b0143 pcnB poly(A) polymerase I (VIMSS) low > 76
Escherichia coli ECRC98 0.68 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.32 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB low > 86
Escherichia coli ECRC101 0.68 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.32 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB low > 87
Escherichia coli ECRC102 0.68 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.32 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECRC100 0.68 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.32 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB low > 80
Escherichia coli ECRC99 0.68 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.32 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia fergusonii Becca 0.68 EFB2_04617 Phosphomethylpyrimidine synthase 0.32 EFB2_03901 Poly(A) polymerase I low > 86
Enterobacter asburiae PDN3 0.68 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.32 EX28DRAFT_3732 poly(A) polymerase low > 76
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.32 MPMX20_00829 Poly(A) polymerase I low > 85
Escherichia coli BL21 0.68 ECD_03871 phosphomethylpyrimidine synthase 0.32 ECD_00142 poly(A) polymerase low > 61
Escherichia coli ECOR38 0.68 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.32 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.33 GFF89 Poly(A) polymerase (EC 2.7.7.19) low > 78
Shewanella loihica PV-4 0.67 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.34 Shew_3131 poly(A) polymerase (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.32 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB low > 74
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.35 B158DRAFT_0058 poly(A) polymerase low > 40
Shewanella oneidensis MR-1 0.66 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.34 SO0872 pcnB polyA polymerase (NCBI ptt file) low > 76
Variovorax sp. SCN45 0.65 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.45 GFF3943 Poly(A) polymerase (EC 2.7.7.19) low > 127
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_00335 phosphomethylpyrimidine synthase 0.34 CSW01_03145 polynucleotide adenylyltransferase PcnB low > 62
Variovorax sp. OAS795 0.64 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.44 ABID97_RS08710 polynucleotide adenylyltransferase PcnB low > 91
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.46 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.43 GFF3438 Poly(A) polymerase (EC 2.7.7.19) low > 90

Not shown: 37 genomes with orthologs for ABZR87_RS04785 only; 0 genomes with orthologs for ABZR87_RS00935 only