Conservation of cofitness between ABZR86_RS07350 and ABZR86_RS09750 in Dyella japonica UNC79MFTsu3.2

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS07350 ribonuclease D 1.0 ABZR86_RS09750 excinuclease ABC subunit UvrB 0.45 17
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS16010 ribonuclease D 0.88 LRK54_RS14235 excinuclease ABC subunit UvrB low > 59
Rhodanobacter denitrificans MT42 0.67 LRK55_RS15770 ribonuclease D 0.88 LRK55_RS13955 excinuclease ABC subunit UvrB low > 63
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_08985 Ribonuclease D 0.88 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB low > 52
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) 0.79 Xcc-8004.2034.1 Excinuclease ABC subunit B low > 74
Shewanella amazonensis SB2B 0.24 Sama_1933 ribonuclease D (RefSeq) 0.67 Sama_1828 excinuclease ABC subunit B (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04420 ribonuclease D 0.70 AO356_21335 excinuclease ABC subunit B low > 104
Shewanella loihica PV-4 0.23 Shew_2187 ribonuclease D (RefSeq) 0.67 Shew_2064 excinuclease ABC subunit B (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) 0.70 Pf6N2E2_52 Excinuclease ABC subunit B low > 103
Marinobacter adhaerens HP15 0.23 HP15_1882 ribonuclease D 0.70 HP15_1372 excinuclease ABC subunit B low > 73
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_17855 ribonuclease D 0.69 AO353_20545 excinuclease ABC subunit B low > 101
Shewanella sp. ANA-3 0.22 Shewana3_2385 ribonuclease D (RefSeq) 0.68 Shewana3_2166 excinuclease ABC subunit B (RefSeq) low > 73
Pseudomonas sp. RS175 0.22 PFR28_00712 Ribonuclease D 0.70 PFR28_02837 UvrABC system protein B low > 88
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) 0.69 Pf1N1B4_26 Excinuclease ABC subunit B low > 87
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1574 ribonuclease D 0.67 B158DRAFT_2341 Excinuclease ABC subunit B low > 40
Rahnella sp. WP5 0.22 EX31_RS10595 ribonuclease D 0.70 EX31_RS23720 excinuclease ABC subunit B low > 89
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) 0.69 PfGW456L13_3959 Excinuclease ABC subunit B low > 87
Shewanella oneidensis MR-1 0.22 SO2580 rnd ribonuclease D (NCBI ptt file) 0.68 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25 0.22 PFLU_RS07465 ribonuclease D 0.69 PFLU_RS20655 excinuclease ABC subunit B low > 109
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS07465 ribonuclease D 0.69 PFLU_RS20655 excinuclease ABC subunit B low > 109
Pseudomonas putida KT2440 0.22 PP_4591 Ribonuclease D 0.71 PP_1974 excinuclease UvrABC protein B — —
Serratia liquefaciens MT49 0.22 IAI46_14530 ribonuclease D 0.70 IAI46_06550 excinuclease ABC subunit B low > 86
Pantoea sp. MT58 0.22 IAI47_08840 ribonuclease D 0.70 IAI47_13505 excinuclease ABC subunit B 0.36 32
Pseudomonas sp. S08-1 0.21 OH686_05315 ribonuclease D 0.70 OH686_04580 excinuclease ABC subunit B low > 80
Pseudomonas stutzeri RCH2 0.21 Psest_2995 ribonuclease D 0.70 Psest_1296 excinuclease ABC, B subunit — —
Pseudomonas simiae WCS417 0.21 PS417_07375 ribonuclease D 0.69 PS417_18685 excinuclease ABC subunit B low > 88
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1563 Ribonuclease D 0.70 Psyr_1974 Excinuclease ABC subunit B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1563 Ribonuclease D 0.70 Psyr_1974 Excinuclease ABC subunit B low > 86
Klebsiella michiganensis M5al 0.21 BWI76_RS17795 ribonuclease D 0.69 BWI76_RS08785 excinuclease ABC subunit B low > 92
Escherichia coli BL21 0.21 ECD_01774 ribonuclease D 0.68 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component 0.54 48
Enterobacter asburiae PDN3 0.21 EX28DRAFT_0755 ribonuclease D 0.68 EX28DRAFT_2211 Excinuclease ABC subunit B low > 76
Escherichia coli ECOR38 0.21 HEPCGN_04995 rnd ribonuclease D 0.68 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB low > 87
Escherichia coli ECRC98 0.21 JDDGAC_01180 rnd ribonuclease D 0.68 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB low > 86
Escherichia coli ECRC100 0.21 OKFHMN_26605 rnd ribonuclease D 0.68 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB low > 80
Escherichia coli ECRC101 0.21 MCAODC_18805 rnd ribonuclease D 0.68 MCAODC_25595 uvrB excinuclease ABC subunit UvrB low > 87
Escherichia coli ECOR27 0.21 NOLOHH_17125 rnd ribonuclease D 0.68 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB low > 75
Escherichia coli ECRC102 0.21 NIAGMN_01460 rnd ribonuclease D 0.68 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli ECRC62 0.21 BNILDI_15910 rnd ribonuclease D 0.68 BNILDI_21020 uvrB excinuclease ABC subunit UvrB low > 75
Escherichia coli ECRC99 0.21 KEDOAH_01505 rnd ribonuclease D 0.68 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01929 Ribonuclease D 0.68 OHPLBJKB_02934 UvrABC system protein B low > 73
Escherichia coli BW25113 0.21 b1804 rnd ribonuclease D (NCBI) 0.68 b0779 uvrB excinuclease ABC subunit B (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.20 HER17_RS11270 ribonuclease D 0.70 HER17_RS13420 excinuclease ABC subunit B low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS10035 ribonuclease D 0.68 ECOLIN_RS04150 excinuclease ABC subunit UvrB — —
Enterobacter sp. TBS_079 0.20 MPMX20_02710 Ribonuclease D 0.69 MPMX20_01408 UvrABC system protein B low > 85
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_09900 ribonuclease D 0.70 CSW01_05185 excinuclease ABC subunit UvrB low > 62
Escherichia fergusonii Becca 0.20 EFB2_02196 Ribonuclease D 0.68 EFB2_03326 UvrABC system protein B low > 86
Azospirillum sp. SherDot2 0.20 MPMX19_00986 Ribonuclease D 0.59 MPMX19_01038 UvrABC system protein B low > 112
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF2819 Ribonuclease D (EC 3.1.26.3) 0.68 GFF675 Excinuclease ABC subunit B low > 78
Dickeya dadantii 3937 0.20 DDA3937_RS11220 ribonuclease D 0.70 DDA3937_RS08530 excinuclease ABC subunit B low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS11255 ribonuclease D 0.70 HGI48_RS08695 excinuclease ABC subunit B low > 71
Alteromonas macleodii MIT1002 0.19 MIT1002_02587 Ribonuclease D 0.68 MIT1002_01261 Excinuclease ABC subunit B low > 70
Dickeya dianthicola ME23 0.19 DZA65_RS11600 ribonuclease D 0.70 DZA65_RS08990 excinuclease ABC subunit B low > 75
Azospirillum brasilense Sp245 0.19 AZOBR_RS16220 ribonuclease D 0.60 AZOBR_RS16420 excinuclease ABC subunit B low > 97
Erwinia tracheiphila SCR3 0.19 LU632_RS13130 rnd ribonuclease D 0.69 LU632_RS09160 uvrB excinuclease ABC subunit B low > 74
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_0222 ribonuclease D 0.55 Ga0059261_3779 Excinuclease ABC subunit B — —
Caulobacter crescentus NA1000 0.18 CCNA_01776 ribonuclease D 0.58 CCNA_03076 excinuclease ABC subunit B — —
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_01776 ribonuclease D 0.58 CCNA_03076 excinuclease ABC subunit B — —
Acinetobacter radioresistens SK82 0.17 MPMX26_01642 Ribonuclease D 0.67 MPMX26_02142 UvrABC system protein B low > 36

Not shown: 3 genomes with orthologs for ABZR86_RS07350 only; 41 genomes with orthologs for ABZR86_RS09750 only