| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dyella japonica UNC79MFTsu3.2 | 1.0 | ABZR86_RS07060 | | ABC transporter transmembrane domain-containing protein | 1.0 | ABZR86_RS07195 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | 0.46 | 7 |
| Rhodanobacter denitrificans FW104-10B01 | 0.83 | LRK54_RS17125 | | ABC transporter transmembrane domain-containing protein | 0.85 | LRK54_RS16925 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.80 | OKGIIK_07760 | mdlB | ABC transporter | 0.85 | OKGIIK_07915 | | 3-hydroxyacyl-CoA dehydrogenase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.79 | LRK55_RS16835 | | ABC transporter transmembrane domain-containing protein | 0.85 | LRK55_RS16640 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 63 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS13785 | | ABC transporter transmembrane domain-containing protein | 0.60 | ABIE51_RS13895 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.3417.1 | | ABC-type multidrug transport system, ATPase and permease components | 0.59 | Xcc-8004.3683.1 | | Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 74 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03383 | | multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein | 0.22 | CCNA_00074 | | multifunctional fatty acid oxidation complex subunit alpha FadJ | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03383 | | multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein | 0.22 | CCNA_00074 | | multifunctional fatty acid oxidation complex subunit alpha FadJ | low | > 67 |
| Agrobacterium fabrum C58 | 0.50 | Atu3744 | | ABC transporter permease | 0.22 | Atu0503 | | enoyl-CoA hydratase | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS20770 | | ABC transporter transmembrane domain-containing protein | 0.16 | QEN71_RS21890 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | 0.32 | 56 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS08845 | | ABC transporter transmembrane domain-containing protein | 0.22 | A4249_RS12610 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 48 |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_004740 | | ABC transporter transmembrane domain-containing protein | 0.24 | TX73_004220 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | — | — |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS20895 | | ABC transporter | 0.17 | BPHYT_RS13545 | | 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) (from data) | low | > 109 |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_c22190 | | lipid A export ATP-binding/permease protein MsbA | 0.20 | PGA1_c12020 | | fatty acid oxidation complex FadJ subunit alpha | — | — |
| Azospirillum sp. SherDot2 | 0.48 | MPMX19_01923 | | Putative multidrug export ATP-binding/permease protein | 0.18 | MPMX19_06944 | | Fatty acid oxidation complex subunit alpha | low | > 112 |
| Variovorax sp. SCN45 | 0.47 | GFF4767 | | Efflux ABC transporter, permease/ATP-binding protein | 0.16 | GFF1342 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3699 | | ABC transporter ATP-binding protein | 0.22 | GFF875 | | Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 90 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS20410 | | ABC transporter transmembrane domain-containing protein | 0.16 | ABID97_RS15740 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 91 |
| Sinorhizobium meliloti 1021 | 0.46 | SMc03991 | | ABC transporter ATP-binding protein | 0.24 | SMc02227 | | fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase | — | — |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_1436 | | ABC transporter, ATP binding/permease protein | 0.21 | Ac3H11_1931 | | Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_1830 | | ABC transporter, transmembrane region:ABC transporter | 0.25 | Psyr_3290 | | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_1830 | | ABC transporter, transmembrane region:ABC transporter | 0.25 | Psyr_3290 | | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_0852 | | lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq) | 0.22 | Dshi_0835 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) | low | > 64 |
| Shewanella oneidensis MR-1 | 0.44 | SO3665 | | ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) | 0.25 | SO3088 | | fatty oxidation complex, alpha subunit (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_3232 | | lipid ABC transporter ATPase/inner membrane protein (RefSeq) | 0.25 | Shewana3_1461 | fadJ | multifunctional fatty acid oxidation complex subunit alpha (RefSeq) | low | > 73 |
| Sphingomonas koreensis DSMZ 15582 | 0.44 | Ga0059261_3276 | | ABC-type multidrug transport system, ATPase and permease components | 0.18 | Ga0059261_0837 | | 3-hydroxyacyl-CoA dehydrogenase | low | > 68 |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS07625 | | ABC transporter ATP-binding protein/permease | 0.24 | PFLU_RS07650 | | fatty acid oxidation complex subunit alpha FadB | low | > 109 |
| Pseudomonas simiae WCS417 | 0.44 | PS417_07545 | | ABC transporter ATP-binding protein | 0.25 | PS417_07575 | | multifunctional fatty acid oxidation complex subunit alpha | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS07625 | | ABC transporter ATP-binding protein/permease | 0.24 | PFLU_RS07650 | | fatty acid oxidation complex subunit alpha FadB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_2295 | | Lipid A export ATP-binding/permease protein MsbA | 0.25 | Pf6N2E2_2290 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | — | — |
| Shewanella loihica PV-4 | 0.43 | Shew_3087 | | lipid ABC transporter ATPase/inner membrane protein (RefSeq) | 0.25 | Shew_2425 | fadJ | multifunctional fatty acid oxidation complex subunit alpha (RefSeq) | low | > 60 |
| Pseudomonas sp. RS175 | 0.42 | PFR28_01105 | | Lipid A export ATP-binding/permease protein MsbA | 0.25 | PFR28_01110 | | Fatty acid oxidation complex subunit alpha | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_4046 | | Lipid A export ATP-binding/permease protein MsbA | 0.25 | PfGW456L13_4041 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_3896 | | Lipid A export ATP-binding/permease protein MsbA | 0.25 | Pf1N1B4_3903 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_02355 | | ABC transporter ATP-binding protein | 0.25 | AO356_02330 | | multifunctional fatty acid oxidation complex subunit alpha | — | — |
| Pseudomonas sp. S08-1 | 0.42 | OH686_02040 | | Efflux ABC transporter, permease/ATP-binding protein | 0.25 | OH686_21925 | | fatty oxidation complex, alpha subunit FadB | low | > 80 |
| Pseudomonas putida KT2440 | 0.42 | PP_2119 | | putative ABC efflux transporter, permease/ATP-binding protein | 0.26 | PP_2136 | | enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase | low | > 96 |
| Shewanella amazonensis SB2B | 0.41 | Sama_2908 | | ABC transporter, ATP-binding/permease protein, putative (RefSeq) | 0.25 | Sama_2167 | fadJ | multifunctional fatty acid oxidation complex subunit alpha (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.41 | HP15_3709 | | lipid A ABC transporter ATPase/inner membrane protein | 0.25 | HP15_1512 | | Enoyl-CoA hydratase (EC 4.2.1.17) (from data) | low | > 73 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_00535 | | ABC transporter ATP-binding protein | 0.24 | AO353_00510 | | multifunctional fatty acid oxidation complex subunit alpha | low | > 101 |
| Alteromonas macleodii MIT1002 | 0.40 | MIT1002_01305 | | Putative multidrug export ATP-binding/permease protein | 0.27 | MIT1002_01287 | | Fatty acid oxidation complex subunit alpha | low | > 70 |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS09345 | | ABC transporter transmembrane domain-containing protein | 0.23 | ABIE41_RS23310 | | FAD-dependent oxidoreductase | low | > 77 |
| Castellaniella sp019104865 MT123 | 0.26 | ABCV34_RS13160 | | ABC transporter ATP-binding protein | 0.15 | ABCV34_RS09055 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 48 |
Not shown: 16 genomes with orthologs for ABZR86_RS07060 only; 39 genomes with orthologs for ABZR86_RS07195 only