Conservation of cofitness between ABZR86_RS08525 and ABZR86_RS03585 in Dyella japonica UNC79MFTsu3.2

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dyella japonica UNC79MFTsu3.2 1.0 ABZR86_RS08525 MFS transporter 1.0 ABZR86_RS03585 FdhF/YdeP family oxidoreductase 0.40 11
Pseudomonas putida KT2440 0.73 PP_1400 Alpha-ketoglutarate permease 0.51 PP_4596 putative oxidoreductase low > 96
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3999 General substrate transporter:Major facilitator superfamily 0.51 Psyr_4946 Oxidoreductase alpha (molybdopterin) subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3999 General substrate transporter:Major facilitator superfamily 0.51 Psyr_4946 Oxidoreductase alpha (molybdopterin) subunit low > 86
Pseudomonas sp. RS175 0.72 PFR28_03468 Alpha-ketoglutarate permease 0.51 PFR28_04881 Protein YdeP low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_03810 Alpha-ketoglutarate permease, MFS superfamily (from data) 0.50 AO353_11825 CbbBc protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_17790 alpha-ketoglutarate permease (MHS family) (from data) 0.50 AO356_10105 CbbBc protein low > 104
Pseudomonas fluorescens SBW25 0.72 PFLU_RS24285 MFS transporter 0.51 PFLU_RS01360 FdhF/YdeP family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS24285 MFS transporter 0.51 PFLU_RS01360 FdhF/YdeP family oxidoreductase low > 109
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5486 Alpha-ketoglutarate permease (from data) 0.51 Pf6N2E2_3891 Putative formate dehydrogenase oxidoreductase protein low > 103
Pseudomonas simiae WCS417 0.72 PS417_22650 MFS transporter 0.51 PS417_01265 CbbBc protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_686 Dicarboxylate MFS transporter 0.50 Pf1N1B4_1674 Putative formate dehydrogenase oxidoreductase protein low > 87
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1805 Dicarboxylate MFS transporter 0.50 PfGW456L13_409 Putative formate dehydrogenase oxidoreductase protein low > 87
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS16295 MFS transporter 0.54 ABZR87_RS19695 FdhF/YdeP family oxidoreductase low > 80
Lysobacter sp. OAE881 0.66 ABIE51_RS02120 MFS transporter 0.51 ABIE51_RS14790 FdhF/YdeP family oxidoreductase low > 62
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS23235 MFS transporter 0.53 RALBFv3_RS18760 formate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.66 UW163_RS16485 MFS transporter 0.53 UW163_RS20370 formate dehydrogenase — —
Ralstonia solanacearum PSI07 0.66 RPSI07_RS00035 MFS transporter 0.54 RPSI07_RS04835 formate dehydrogenase 0.37 68
Ralstonia solanacearum GMI1000 0.65 RS_RS17230 MFS transporter 0.54 RS_RS22190 formate dehydrogenase oxidoreduct low > 80
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS05955 MFS transporter 0.38 ABZR88_RS07875 FdhF/YdeP family oxidoreductase low > 71
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_3091 Sugar (and other) transporter 0.50 Ga0059261_3868 oxidoreductase alpha (molybdopterin) subunit low > 68
Agrobacterium fabrum C58 0.59 Atu4017 MFS permease 0.62 Atu4776 formate dehydrogenase alpha subunit low > 89
Bosea sp. OAE506 0.53 ABIE41_RS20905 MFS transporter 0.43 ABIE41_RS15285 FdhF/YdeP family oxidoreductase low > 77
Paraburkholderia graminis OAS925 0.52 ABIE53_002314 MHS family alpha-ketoglutarate permease-like MFS transporter 0.51 ABIE53_002825 molybdopterin-dependent oxidoreductase alpha subunit low > 113
Pantoea sp. MT58 0.51 IAI47_04465 MFS transporter 0.64 IAI47_21415 FdhF/YdeP family oxidoreductase low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_03456 Alpha-ketoglutarate permease 0.57 MPMX20_02683 Protein YdeP low > 85
Pectobacterium carotovorum WPP14 0.50 HER17_RS04420 MFS transporter 0.49 HER17_RS09435 FdhF/YdeP family oxidoreductase low > 75
Variovorax sp. SCN45 0.50 GFF5985 dicarboxylic acid transporter PcaT 0.59 GFF6598 Putative formate dehydrogenase oxidoreductase protein low > 127
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05236 MFS transporter, MHS family, alpha-ketoglutarate permease 0.68 H281DRAFT_01420 oxidoreductase alpha (molybdopterin) subunit 0.35 39
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0060 metabolite-proton symporter 0.57 EX28DRAFT_0785 oxidoreductase alpha (molybdopterin) subunit low > 76
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS07390 MFS family transporter 0.58 QEN71_RS37510 FdhF/YdeP family oxidoreductase low > 153
Dickeya dadantii 3937 0.50 DDA3937_RS16800 MFS transporter 0.50 DDA3937_RS12475 FdhF/YdeP family oxidoreductase low > 74
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS11175 alpha-ketoglutarate transporter 0.52 BPHYT_RS13070 oxidoreductase molybdopterin subunit low > 109
Serratia liquefaciens MT49 0.50 IAI46_20040 MFS transporter 0.49 IAI46_13855 FdhF/YdeP family oxidoreductase low > 86
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01071 alpha-ketoglutarate permease 0.57 CCNA_01301 NAD-dependent formate dehydrogenase alpha subunit low > 67
Caulobacter crescentus NA1000 0.49 CCNA_01071 alpha-ketoglutarate permease 0.57 CCNA_01301 NAD-dependent formate dehydrogenase alpha subunit low > 66
Escherichia coli ECRC101 0.49 MCAODC_11830 kgtP alpha-ketoglutarate permease 0.59 MCAODC_16695 ydeP acid resistance putative oxidoreductase YdeP low > 87
Escherichia coli BW25113 0.49 b2587 kgtP alpha-ketoglutarate transporter (NCBI) 0.59 b1501 YdeP putative oxidoreductase, major subunit, acid resistance protein (Katherine Huang) low > 76
Escherichia coli BL21 0.49 ECD_02481 alpha-ketoglutarate transporter 0.59 ECD_01459 putative oxidoreductase low > 61
Escherichia coli ECRC100 0.49 OKFHMN_21300 kgtP alpha-ketoglutarate permease 0.59 OKFHMN_01245 ydeP acid resistance putative oxidoreductase YdeP low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_01119 Alpha-ketoglutarate permease 0.59 OHPLBJKB_02216 Protein YdeP low > 73
Escherichia coli ECRC98 0.49 JDDGAC_24965 kgtP alpha-ketoglutarate permease 0.59 JDDGAC_03735 ydeP acid resistance putative oxidoreductase YdeP low > 86
Escherichia coli ECRC62 0.49 BNILDI_11775 kgtP alpha-ketoglutarate permease 0.59 BNILDI_17375 ydeP acid resistance putative oxidoreductase YdeP low > 75
Escherichia coli ECRC99 0.49 KEDOAH_06920 kgtP alpha-ketoglutarate permease 0.59 KEDOAH_27195 ydeP acid resistance putative oxidoreductase YdeP — —
Escherichia coli ECOR27 0.49 NOLOHH_12970 kgtP alpha-ketoglutarate permease 0.59 NOLOHH_18885 ydeP acid resistance putative oxidoreductase YdeP 0.51 41
Escherichia coli ECOR38 0.49 HEPCGN_20425 kgtP alpha-ketoglutarate permease 0.59 HEPCGN_26555 ydeP acid resistance putative oxidoreductase YdeP low > 87
Escherichia coli ECRC102 0.49 NIAGMN_19070 kgtP alpha-ketoglutarate permease 0.59 NIAGMN_25375 ydeP acid resistance putative oxidoreductase YdeP — —
Escherichia coli Nissle 1917 0.49 ECOLIN_RS14640 alpha-ketoglutarate permease 0.59 ECOLIN_RS08610 acid resistance putative oxidoreductase YdeP low > 55
Escherichia fergusonii Becca 0.49 EFB2_01309 Alpha-ketoglutarate permease 0.59 EFB2_02499 Protein YdeP low > 86
Klebsiella michiganensis M5al 0.48 BWI76_RS21415 MFS transporter 0.57 BWI76_RS13875 CbbBc protein low > 92
Rahnella sp. WP5 0.48 EX31_RS13690 MFS transporter 0.49 EX31_RS07150 FdhF/YdeP family oxidoreductase low > 89
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS16820 2-oxoglutarate:H+ symporter (from data) 0.52 HSERO_RS08385 anaerobic (selenocysteine-containing) formate dehydrogenase low > 78
Mycobacterium tuberculosis H37Rv 0.39 Rv3476c Probable dicarboxylic acid transport integral membrane protein KgtP (dicarboxylate transporter) 0.39 Rv2900c Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.5310.1 dicarboxylate transport protein 0.51 Xcc-8004.2195.1 Putative formate dehydrogenase oxidoreductase protein low > 74
Pseudomonas stutzeri RCH2 0.31 Psest_1584 Arabinose efflux permease 0.50 Psest_2422 oxidoreductase alpha (molybdopterin) subunit low > 67
Erwinia tracheiphila SCR3 0.24 LU632_RS20530 MFS transporter 0.47 LU632_RS12250 FdhF/YdeP family oxidoreductase low > 74

Not shown: 12 genomes with orthologs for ABZR86_RS08525 only; 5 genomes with orthologs for ABZR86_RS03585 only