Conservation of cofitness between Sama_3388 and Sama_2191 in Shewanella amazonensis SB2B

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_3388 hypothetical protein (RefSeq) 1.0 Sama_2191 secD preprotein translocase subunit SecD (RefSeq) 0.50 15
Shewanella oneidensis MR-1 0.41 SO4377 membrane protein, putative (NCBI ptt file) 0.85 SO3111 secD-2 protein-export membrane protein SecD (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.40 Shew_3520 hypothetical protein (RefSeq) 0.84 Shew_2335 secD preprotein translocase subunit SecD (RefSeq)
Shewanella sp. ANA-3 0.39 Shewana3_0332 hypothetical protein (RefSeq) 0.87 Shewana3_1437 secD preprotein translocase subunit SecD (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_0425 Predicted exporter 0.43 B158DRAFT_2518 protein-export membrane protein, SecD/SecF family
Ralstonia solanacearum GMI1000 0.20 RS_RS18895 membrane protein 0.41 RS_RS13585 protein translocase subunit SecD
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS03850 MMPL family transporter 0.41 QEN71_RS26650 protein translocase subunit SecD
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS15150 membrane protein 0.40 BPHYT_RS03420 preprotein translocase subunit SecD
Rahnella sp. WP5 0.19 EX31_RS21260 MMPL family transporter 0.61 EX31_RS22105 protein translocase subunit SecD
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_03975 Predicted exporter 0.40 H281DRAFT_04668 preprotein translocase subunit SecD
Paraburkholderia graminis OAS925 0.19 ABIE53_003202 putative exporter 0.38 ABIE53_000829 preprotein translocase subunit SecD
Serratia liquefaciens MT49 0.17 IAI46_04080 MMPL family transporter 0.61 IAI46_04850 protein translocase subunit SecD
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS31215 membrane protein 0.40 RR42_RS17410 preprotein translocase subunit SecD
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_1512 FIG021862: membrane protein, exporter 0.44 Pf1N1B4_3008 Protein-export membrane protein SecD (TC 3.A.5.1.1)
Enterobacter sp. TBS_079 0.15 MPMX20_04367 hypothetical protein 0.57 MPMX20_00999 Protein translocase subunit SecD
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS18520 exporter 0.40 HSERO_RS06220 preprotein translocase subunit SecD
Enterobacter asburiae PDN3 0.15 EX28DRAFT_4095 Predicted exporter 0.56 EX28DRAFT_2563 protein-export membrane protein, SecD/SecF family
Escherichia coli Nissle 1917 0.15 ECOLIN_RS05465 MMPL family transporter 0.59 ECOLIN_RS02475 protein translocase subunit SecD
Escherichia fergusonii Becca 0.15 EFB2_03034 hypothetical protein 0.58 EFB2_03649 Protein translocase subunit SecD
Dickeya dianthicola 67-19 0.15 HGI48_RS21510 MMPL family transporter 0.57 HGI48_RS05540 protein translocase subunit SecD
Pseudomonas fluorescens GW456-L13 0.15 PfGW456L13_245 FIG021862: membrane protein, exporter 0.45 PfGW456L13_4880 Protein-export membrane protein SecD (TC 3.A.5.1.1)
Dickeya dianthicola ME23 0.14 DZA65_RS22490 hypothetical protein 0.57 DZA65_RS05865 protein translocase subunit SecD
Pseudomonas simiae WCS417 0.14 PS417_02065 membrane protein 0.44 PS417_23235 preprotein translocase subunit SecD
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_3721 FIG021862: membrane protein, exporter 0.45 Pf6N2E2_3196 Protein-export membrane protein SecD (TC 3.A.5.1.1)
Pseudomonas fluorescens SBW25 0.14 PFLU_RS02110 MMPL family transporter 0.44 PFLU_RS24890 protein translocase subunit SecD
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS02110 MMPL family transporter 0.44 PFLU_RS24890 protein translocase subunit SecD
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_0429 membrane protein, putative 0.43 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_0429 membrane protein, putative 0.43 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein
Escherichia coli ECRC101 0.14 OKFHMN_16585 Conserved integral membrane protein 0.57 OKFHMN_08495 secD Protein translocase subunit SecD
Escherichia coli ECRC98 0.14 JDDGAC_20215 Conserved integral membrane protein 0.57 JDDGAC_12150 secD Protein translocase subunit SecD
Escherichia coli ECRC101 0.14 MCAODC_07105 Conserved integral membrane protein 0.57 MCAODC_27720 secD Protein translocase subunit SecD
Escherichia coli ECRC99 0.14 KEDOAH_11555 Conserved integral membrane protein 0.57 KEDOAH_19470 secD Protein translocase subunit SecD
Escherichia coli ECRC102 0.14 NIAGMN_14355 Conserved integral membrane protein 0.57 NIAGMN_06550 secD Protein translocase subunit SecD
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_12645 hypothetical protein 0.43 AO353_15800 preprotein translocase subunit SecD
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_09190 hypothetical protein 0.44 AO356_06680 preprotein translocase subunit SecD
Pantoea sp. MT58 0.14 IAI47_12335 MMPL family transporter 0.58 IAI47_14795 protein translocase subunit SecD
Pseudomonas sp. RS175 0.13 PFR28_05028 hypothetical protein 0.45 PFR28_00279 Protein translocase subunit SecD
Pseudomonas stutzeri RCH2 0.13 Psest_3698 Predicted exporter 0.44 Psest_1244 protein-export membrane protein, SecD/SecF family
Castellaniella sp019104865 MT123 0.12 ABCV34_RS14940 MMPL family transporter 0.37 ABCV34_RS15355 protein translocase subunit SecD
Pseudomonas sp. S08-1 0.12 OH686_09935 membrane protein, exporter 0.44 OH686_17440 Protein translocase subunit SecD
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS13555 MMPL family transporter 0.38 ABZR86_RS09530 protein translocase subunit SecD
Xanthomonas campestris pv. campestris strain 8004 0.08 Xcc-8004.5085.1 FIG021862: membrane protein, exporter 0.39 Xcc-8004.2170.1 Protein-export membrane protein SecD (TC 3.A.5.1.1)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.08 GFF3005 FIG021862: membrane protein, exporter 0.40 GFF2568 Protein-export membrane protein SecD (TC 3.A.5.1.1)
Variovorax sp. SCN45 0.08 GFF312 FIG021862: membrane protein, exporter 0.44 GFF5485 Protein translocase subunit SecD
Ralstonia sp. UNC404CL21Col 0.07 ABZR87_RS07235 MMPL family transporter 0.41 ABZR87_RS01290 protein translocase subunit SecD
Variovorax sp. OAS795 0.07 ABID97_RS16785 transporter 0.41 ABID97_RS01850 protein translocase subunit SecD

Not shown: 2 genomes with orthologs for Sama_3388 only; 36 genomes with orthologs for Sama_2191 only