Conservation of cofitness between BT2241 and BT3759 in Bacteroides thetaiotaomicron VPI-5482

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2241 DNA-damage-inducible protein F (NCBI ptt file) 1.0 BT3759 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) 0.26 17
Bacteroides ovatus ATCC 8483 0.91 BACOVA_03104 MATE efflux family protein 0.97 BACOVA_03589 N-acetyl-gamma-glutamyl-phosphate reductase 0.42 70
Phocaeicola vulgatus CL09T03C04 0.77 HMPREF1058_RS13880 MATE family efflux transporter 0.89 HMPREF1058_RS08840 N-acetyl-gamma-glutamyl-phosphate reductase low > 67
Phocaeicola dorei CL03T12C01 0.76 ABI39_RS09485 MATE family efflux transporter 0.89 ABI39_RS02970 N-acetyl-gamma-glutamyl-phosphate reductase low > 72
Bacteroides stercoris CC31F 0.75 HMPREF1181_RS09420 MATE family efflux transporter 0.95 HMPREF1181_RS03450 N-acetyl-gamma-glutamyl-phosphate reductase low > 56
Parabacteroides merdae CL09T00C40 0.68 HMPREF1078_RS15090 MATE family efflux transporter 0.79 HMPREF1078_RS10580 N-acetyl-gamma-glutamyl-phosphate reductase low > 61
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_00480 MATE family efflux transporter 0.21 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase low > 62
Marinobacter adhaerens HP15 0.31 HP15_3770 MATE efflux family protein 0.28 HP15_352 N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS04895 MATE family efflux transporter 0.14 QEN71_RS33725 N-acetyl-gamma-glutamyl-phosphate reductase low > 153
Dinoroseobacter shibae DFL-12 0.30 Dshi_0845 MATE efflux family protein (RefSeq) 0.18 Dshi_1759 N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.29 Psest_3364 putative efflux protein, MATE family 0.31 Psest_3639 N-acetyl-gamma-glutamyl-phosphate reductase, common form — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4384 Multi antimicrobial extrusion protein MatE 0.30 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4384 Multi antimicrobial extrusion protein MatE 0.30 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Shewanella amazonensis SB2B 0.29 Sama_3501 DNA-damage-inducible protein F (RefSeq) 0.16 Sama_0256 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) low > 62
Phaeobacter inhibens DSM 17395 0.29 PGA1_c12130 DNA-damage-inducible protein F 0.18 PGA1_c17050 N-acetyl-gamma-glutamyl-phosphate reductase ArgC 0.35 30
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1292 DNA-damage-inducible protein F 0.30 Pf1N1B4_2559 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) — —
Pseudomonas simiae WCS417 0.28 PS417_03010 XRE family transcriptional regulator 0.30 PS417_25660 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_40 DNA-damage-inducible protein F 0.30 PfGW456L13_1233 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_13735 MATE family efflux transporter 0.30 AO353_07155 N-acetyl-gamma-glutamyl-phosphate reductase low > 101
Pseudomonas putida KT2440 0.28 PP_0569 MATE efflux family protein 0.30 PP_0432 N-acetyl-gamma-glutamyl-phosphate reductase 1 low > 96
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0674 putative efflux protein, MATE family 0.21 B158DRAFT_1979 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 40
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3500 DNA-damage-inducible protein F 0.30 Pf6N2E2_4836 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 103
Rahnella sp. WP5 0.27 EX31_RS11850 MATE family efflux transporter DinF 0.21 EX31_RS14190 N-acetyl-gamma-glutamyl-phosphate reductase low > 89
Shewanella loihica PV-4 0.27 Shew_0107 MATE efflux family protein (RefSeq) 0.18 Shew_0202 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) low > 60
Serratia liquefaciens MT49 0.27 IAI46_23000 MATE family efflux transporter DinF 0.22 IAI46_24515 N-acetyl-gamma-glutamyl-phosphate reductase low > 86
Shewanella oneidensis MR-1 0.27 SO4617 dinF DNA-damage-inducible protein F (NCBI ptt file) 0.17 SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) low > 76
Pantoea sp. MT58 0.27 IAI47_17885 MATE family efflux transporter DinF 0.23 IAI47_00905 N-acetyl-gamma-glutamyl-phosphate reductase low > 76
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS03090 MATE family efflux transporter 0.30 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS03090 MATE family efflux transporter 0.30 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Klebsiella michiganensis M5al 0.26 BWI76_RS01880 MATE family efflux transporter 0.20 BWI76_RS00845 N-acetyl-gamma-glutamyl-phosphate reductase low > 92
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_08140 MATE family efflux transporter 0.30 AO356_14490 N-acetyl-gamma-glutamyl-phosphate reductase low > 104
Alteromonas macleodii MIT1002 0.26 MIT1002_04023 DNA-damage-inducible protein F 0.19 MIT1002_00471 N-acetyl-gamma-glutamyl-phosphate reductase low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1413 DNA-damage-inducible protein F 0.22 GFF2344 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4268 putative efflux protein, MATE family 0.21 EX28DRAFT_4420 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 76
Pseudomonas sp. RS175 0.26 PFR28_05231 DNA damage-inducible protein F 0.30 PFR28_04033 N-acetyl-gamma-glutamyl-phosphate reductase low > 88
Enterobacter sp. TBS_079 0.26 MPMX20_00260 DNA damage-inducible protein F 0.22 MPMX20_04522 N-acetyl-gamma-glutamyl-phosphate reductase low > 85
Escherichia coli ECOR27 0.26 NOLOHH_05215 dinF MATE family efflux transporter DinF 0.20 NOLOHH_05730 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03999 DNA damage-inducible protein F 0.20 OHPLBJKB_04092 N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Shewanella sp. ANA-3 0.26 Shewana3_4001 MATE efflux family protein (RefSeq) 0.18 Shewana3_3905 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) low > 73
Escherichia coli BL21 0.26 ECD_03916 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein 0.20 ECD_03843 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding low > 60
Escherichia coli BW25113 0.26 b4044 dinF DNA-damage-inducible SOS response protein (NCBI) 0.20 b3958 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) low > 76
Escherichia coli ECRC62 0.26 BNILDI_06305 dinF MATE family efflux transporter DinF 0.20 BNILDI_05795 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli Nissle 1917 0.25 ECOLIN_RS23340 MATE family efflux transporter DinF 0.19 ECOLIN_RS22845 N-acetyl-gamma-glutamyl-phosphate reductase low > 52
Escherichia fergusonii Becca 0.25 EFB2_04559 DNA damage-inducible protein F 0.19 EFB2_04656 N-acetyl-gamma-glutamyl-phosphate reductase low > 86
Escherichia coli ECRC101 0.25 MCAODC_03560 dinF MATE family efflux transporter DinF 0.19 MCAODC_04085 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC102 0.25 NIAGMN_10810 dinF MATE family efflux transporter DinF 0.19 NIAGMN_11335 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC99 0.25 KEDOAH_15100 dinF MATE family efflux transporter DinF 0.19 KEDOAH_14575 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC98 0.25 JDDGAC_16685 dinF MATE family efflux transporter DinF 0.19 JDDGAC_17210 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECRC101 0.25 OKFHMN_13060 dinF MATE family efflux transporter DinF 0.19 OKFHMN_13585 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Escherichia coli ECOR38 0.25 HEPCGN_11580 dinF MATE family efflux transporter DinF 0.20 HEPCGN_12230 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 85
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS00490 MATE family efflux transporter 0.22 ABZR86_RS08700 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) low > 74
Pseudomonas sp. S08-1 0.21 OH686_07530 MATE efflux family protein 0.30 OH686_15195 N-acetyl-gamma-glutamyl-phosphate reductase low > 80
Mycobacterium tuberculosis H37Rv 0.06 Rv2836c Possible DNA-damage-inducible protein F DinF 0.19 Rv1652 Probable N-acetyl-gamma-glutamyl-phoshate reductase ArgC — —

Not shown: 11 genomes with orthologs for BT2241 only; 37 genomes with orthologs for BT3759 only