Conservation of cofitness between b2019 and b3771 in Escherichia coli BW25113

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2019 hisG ATP phosphoribosyltransferase (NCBI) 1.0 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.96 2
Escherichia fergusonii Becca 1.00 EFB2_01837 ATP phosphoribosyltransferase 0.99 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC62 1.00 BNILDI_14745 hisG ATP phosphoribosyltransferase 1.00 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS11940 ATP phosphoribosyltransferase 0.99 ECOLIN_RS21665 dihydroxy-acid dehydratase — —
Escherichia coli ECOR27 1.00 NOLOHH_15835 hisG ATP phosphoribosyltransferase 1.00 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01681 ATP phosphoribosyltransferase 1.00 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_03225 hisG ATP phosphoribosyltransferase 1.00 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli ECRC101 1.00 MCAODC_20420 hisG ATP phosphoribosyltransferase 1.00 MCAODC_05145 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 1.00 OKFHMN_24520 hisG ATP phosphoribosyltransferase 1.00 OKFHMN_14640 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC98 1.00 JDDGAC_28630 hisG ATP phosphoribosyltransferase 1.00 JDDGAC_18260 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC102 1.00 NIAGMN_22465 hisG ATP phosphoribosyltransferase 1.00 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC99 1.00 KEDOAH_03630 hisG ATP phosphoribosyltransferase 1.00 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 1.00 ECD_01921 ATP phosphoribosyltransferase 1.00 ECD_03649 dihydroxyacid dehydratase 0.30 25
Enterobacter sp. TBS_079 0.97 MPMX20_03001 ATP phosphoribosyltransferase 0.97 MPMX20_04499 Dihydroxy-acid dehydratase 0.96 7
Enterobacter asburiae PDN3 0.97 EX28DRAFT_0540 ATP phosphoribosyltransferase 0.96 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.85 24
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF3913 ATP phosphoribosyltransferase (EC 2.4.2.17) 0.97 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Klebsiella michiganensis M5al 0.95 BWI76_RS18920 ATP phosphoribosyltransferase 0.96 BWI76_RS00975 dihydroxy-acid dehydratase 0.90 5
Pectobacterium carotovorum WPP14 0.91 HER17_RS12225 ATP phosphoribosyltransferase 0.91 HER17_RS01075 dihydroxy-acid dehydratase 0.96 9
Dickeya dianthicola 67-19 0.91 HGI48_RS09750 ATP phosphoribosyltransferase 0.91 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Rahnella sp. WP5 0.91 EX31_RS11435 ATP phosphoribosyltransferase 0.87 EX31_RS15005 dihydroxy-acid dehydratase 0.89 13
Dickeya dianthicola ME23 0.91 DZA65_RS10060 ATP phosphoribosyltransferase 0.91 DZA65_RS21335 dihydroxy-acid dehydratase 0.69 34
Dickeya dadantii 3937 0.90 DDA3937_RS09740 ATP phosphoribosyltransferase 0.92 DDA3937_RS20155 dihydroxy-acid dehydratase 0.83 34
Serratia liquefaciens MT49 0.90 IAI46_08215 ATP phosphoribosyltransferase 0.90 IAI46_24345 dihydroxy-acid dehydratase low > 86
Erwinia tracheiphila SCR3 0.89 LU632_RS08950 hisG ATP phosphoribosyltransferase 0.86 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Pantoea sp. MT58 0.88 IAI47_07095 ATP phosphoribosyltransferase 0.89 IAI47_01035 dihydroxy-acid dehydratase 0.98 7
Shewanella sp. ANA-3 0.70 Shewana3_1854 hisG ATP phosphoribosyltransferase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.86 17
Shewanella oneidensis MR-1 0.70 SO2074 hisG ATP phosphoribosyltransferase (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.98 8
Shewanella loihica PV-4 0.69 Shew_2197 hisG ATP phosphoribosyltransferase (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.98 18
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_05745 ATP phosphoribosyltransferase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Shewanella amazonensis SB2B 0.67 Sama_1941 hisG ATP phosphoribosyltransferase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.95 8
Alteromonas macleodii MIT1002 0.66 MIT1002_02632 ATP phosphoribosyltransferase 0.79 MIT1002_04041 Dihydroxy-acid dehydratase 0.92 28
Brevundimonas sp. GW460-12-10-14-LB2 0.50 A4249_RS10690 ATP phosphoribosyltransferase 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.99 18
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_05025 ATP phosphoribosyltransferase 0.28 CA264_06935 dihydroxy-acid dehydratase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2460 ATP phosphoribosyltransferase 0.29 Echvi_2055 dihydroxy-acid dehydratase 0.87 11
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS04865 ATP phosphoribosyltransferase 0.64 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.83 32
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS15870 ATP phosphoribosyltransferase 0.64 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.90 19
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS11830 ATP phosphoribosyltransferase 0.64 ABI39_RS12715 dihydroxy-acid dehydratase 0.75 15
Bacteroides thetaiotaomicron VPI-5482 0.42 BT0200 ATP phosphoribosyltransferase (NCBI ptt file) 0.63 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.92 14
Lysobacter sp. OAE881 0.42 ABIE51_RS13330 ATP phosphoribosyltransferase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.94 13
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS02455 ATP phosphoribosyltransferase 0.65 HMPREF1078_RS16695 dihydroxy-acid dehydratase 0.98 1
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS06885 ATP phosphoribosyltransferase 0.27 ABZR88_RS11575 dihydroxy-acid dehydratase low > 71
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS06735 ATP phosphoribosyltransferase 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase 0.91 36
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS01610 ATP phosphoribosyltransferase 0.26 LRK54_RS10320 dihydroxy-acid dehydratase 0.48 15
Rhodanobacter denitrificans MT42 0.39 LRK55_RS01390 ATP phosphoribosyltransferase 0.26 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_04945 hisG ATP phosphoribosyltransferase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase — —
Bacteroides ovatus ATCC 8483 0.39 BACOVA_01235 ATP phosphoribosyltransferase 0.62 BACOVA_03302 dihydroxy-acid dehydratase 0.94 24
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS03640 ATP phosphoribosyltransferase 0.27 CA265_RS15795 dihydroxy-acid dehydratase 0.90 28
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2949.1 ATP phosphoribosyltransferase (EC 2.4.2.17) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.55 73
Methanococcus maripaludis S2 0.30 MMP_RS04910 ATP phosphoribosyltransferase 0.35 MMP_RS01700 dihydroxy-acid dehydratase — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS00225 ATP phosphoribosyltransferase 0.35 MMJJ_RS03675 dihydroxy-acid dehydratase — —
Bifidobacterium breve UCC2003 0.21 BBR_RS15790 ATP phosphoribosyltransferase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Mycobacterium tuberculosis H37Rv 0.21 Rv2121c ATP phosphoribosyltransferase HisG 0.31 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Desulfovibrio vulgaris Hildenborough JW710 0.16 DVU0114 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.39 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) 0.85 27
Desulfovibrio vulgaris Miyazaki F 0.16 DvMF_1963 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.39 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) 0.86 30
Bosea sp. OAE506 0.12 ABIE41_RS22120 ATP phosphoribosyltransferase 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —

Not shown: 1 genomes with orthologs for b2019 only; 47 genomes with orthologs for b3771 only