Conservation of cofitness between b3093 and b3991 in Escherichia coli BW25113

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3093 exuT hexuronate transporter (NCBI) 1.0 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) 0.26 14
Escherichia coli ECRC98 0.91 JDDGAC_22150 exuT hexuronate transporter ExuT 0.99 JDDGAC_17020 thiG thiazole synthase
Escherichia coli BL21 0.91 ECD_02962 hexuronate transporter 0.98 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_00609 Hexuronate transporter 0.99 OHPLBJKB_04060 Thiazole synthase low > 73
Escherichia coli ECRC101 0.91 OKFHMN_18515 exuT hexuronate transporter ExuT 0.99 OKFHMN_13395 thiG thiazole synthase
Escherichia coli ECRC102 0.91 NIAGMN_16280 exuT hexuronate transporter ExuT 0.99 NIAGMN_11145 thiG thiazole synthase
Escherichia coli ECOR27 0.91 NOLOHH_10315 exuT hexuronate transporter ExuT 0.99 NOLOHH_05540 thiG thiazole synthase low > 57
Escherichia coli ECRC99 0.91 KEDOAH_09630 exuT hexuronate transporter ExuT 0.99 KEDOAH_14765 thiG thiazole synthase
Escherichia coli ECRC101 0.91 MCAODC_09030 exuT hexuronate transporter ExuT 0.99 MCAODC_03895 thiG thiazole synthase
Escherichia coli ECOR38 0.91 HEPCGN_17370 exuT hexuronate transporter ExuT 0.98 HEPCGN_12030 thiG thiazole synthase low > 85
Escherichia coli ECRC62 0.91 BNILDI_01200 exuT hexuronate transporter ExuT 0.99 BNILDI_05985 thiG thiazole synthase
Escherichia fergusonii Becca 0.91 EFB2_00719 Hexuronate transporter 0.98 EFB2_04621 Thiazole synthase low > 86
Escherichia coli Nissle 1917 0.90 ECOLIN_RS17835 hexuronate transporter ExuT 0.98 ECOLIN_RS23020 thiazole synthase low > 52
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3161 D-galactonate transporter 0.91 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_04002 Hexuronate transporter 0.91 MPMX20_00213 Thiazole synthase low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS24735 MFS transporter 0.90 BWI76_RS01535 thiazole synthase low > 92
Pantoea sp. MT58 0.79 IAI47_02905 MFS transporter 0.33 IAI47_20700 thiazole synthase low > 76
Rahnella sp. WP5 0.78 EX31_RS12670 MFS transporter 0.77 EX31_RS16795 thiazole synthase low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS18720 MFS transporter 0.77 HER17_RS20400 thiazole synthase low > 75
Dickeya dadantii 3937 0.78 DDA3937_RS02820 MFS transporter 0.76 DDA3937_RS01155 thiazole synthase low > 74
Serratia liquefaciens MT49 0.77 IAI46_22225 MFS transporter 0.74 IAI46_01300 thiazole synthase low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS02795 MFS transporter 0.75 HGI48_RS01150 thiazole synthase low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS02950 MFS transporter 0.75 DZA65_RS01195 thiazole synthase low > 75
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_14055 hexuronate transporter 0.39 AO356_13375 thiazole synthase low > 104
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS20305 MFS transporter 0.41 ABZR87_RS04800 thiazole synthase
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS11305 hexuronate transporter 0.37 RR42_RS01305 thiazole synthase
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_05311 MFS transporter, ACS family, hexuronate transporter 0.37 H281DRAFT_05639 thiazole-phosphate synthase
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS19710 MFS transporter 0.40 RALBFv3_RS09925 thiazole synthase
Ralstonia solanacearum UW163 0.50 UW163_RS19465 MFS transporter 0.40 UW163_RS03655 thiazole synthase
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS23010 D-galacturonate transporter ExuT (from data) 0.40 HSERO_RS02130 thiazole synthase low > 78
Paraburkholderia graminis OAS925 0.50 ABIE53_006514 ACS family hexuronate transporter-like MFS transporter 0.37 ABIE53_003714 thiazole synthase
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0325 General substrate transporter:TonB box, N-terminal 0.39 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0325 General substrate transporter:TonB box, N-terminal 0.39 Psyr_4740 thiazole-phosphate synthase low > 86
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS24120 hexuronate transporter ExuT 0.38 BPHYT_RS17775 thiazole synthase
Ralstonia solanacearum GMI1000 0.49 RS_RS21110 MFS transporter 0.41 RS_RS00535 thiazole synthase
Ralstonia solanacearum PSI07 0.49 RPSI07_RS03505 MFS transporter 0.41 RPSI07_RS23435 thiazole synthase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3092 Hexuronate transporter 0.93 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Azospirillum brasilense Sp245 0.43 AZOBR_RS23835 hexuronate transporter ExuT 0.41 AZOBR_RS30960 thiazole synthase
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS08830 MFS transporter 0.38 QEN71_RS27930 thiazole synthase
Caulobacter crescentus NA1000 0.42 CCNA_01039 putative hexuronate transporter, major facilitator superfamily 0.40 CCNA_01957 thiazole biosynthesis protein ThiG
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01039 putative hexuronate transporter, major facilitator superfamily 0.40 CCNA_01957 thiazole biosynthesis protein ThiG
Azospirillum sp. SherDot2 0.42 MPMX19_04854 Hexuronate transporter 0.43 MPMX19_00262 Thiazole synthase low > 112
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13945 MFS transporter 0.69 CA264_20420 thiazole synthase low > 74
Lysobacter sp. OAE881 0.23 ABIE51_RS03695 MFS transporter 0.42 ABIE51_RS16545 thiazole synthase
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.5239.1 Hexuronate transporter 0.43 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS13025 MFS transporter 0.62 ABZR88_RS08825 thiazole synthase low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS07640 MFS transporter 0.34 A4249_RS07975 thiazole synthase
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_3106 Sugar phosphate permease 0.66 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis low > 79
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_06195 hypothetical protein 0.39 AO353_08215 thiazole synthase low > 101
Pseudomonas simiae WCS417 0.17 PS417_14775 major facilitator transporter 0.39 PS417_26775 thiazole synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_2746 Hexuronate transporter 0.38 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG low > 87
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_5056 Hexuronate transporter 0.39 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG low > 103
Pseudomonas fluorescens SBW25 0.17 PFLU_RS26375 MFS transporter 0.39 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS26375 MFS transporter 0.39 PFLU_RS28420 thiazole synthase low > 109
Pseudomonas sp. RS175 0.17 PFR28_03815 Hexuronate transporter 0.39 PFR28_04252 Thiazole synthase low > 88
Bacteroides ovatus ATCC 8483 0.16 BACOVA_04896 transporter, major facilitator family protein 0.65 BACOVA_02359 thiazole biosynthesis protein ThiG low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.16 CA265_RS19855 D-galacturonate transporter ExuT (from data) 0.66 CA265_RS20180 thiazole synthase low > 88
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS08950 MFS transporter 0.64 HMPREF1181_RS14680 thiazole synthase low > 56
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS13515 MFS transporter 0.63 HMPREF1058_RS03285 thiazole synthase low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS09040 MFS transporter 0.64 ABI39_RS17755 thiazole synthase low > 72

Not shown: 2 genomes with orthologs for b3093 only; 35 genomes with orthologs for b3991 only