Conservation of cofitness between b1991 and b1972 in Escherichia coli BW25113

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) 1.0 b1972 yedZ hypothetical protein (NCBI) 0.16 20
Escherichia coli BL21 1.00 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.99 ECD_01887 inner membrane heme subunit for periplasmic YedYZ reductase low > 60
Escherichia coli Nissle 1917 0.98 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.89 ECOLIN_RS11205 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECOR38 0.98 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.88 HEPCGN_03910 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 85
Escherichia fergusonii Becca 0.98 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.89 EFB2_01978 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.99 OHPLBJKB_01757 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 73
Escherichia coli ECRC62 0.97 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.99 BNILDI_14970 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECOR27 0.97 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 NOLOHH_16180 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC101 0.96 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.99 OKFHMN_25550 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC102 0.96 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 NIAGMN_02505 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC99 0.96 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 KEDOAH_02545 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC101 0.96 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 MCAODC_19845 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Escherichia coli ECRC98 0.96 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1.00 JDDGAC_00135 msrQ protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.78 GFF2130 FIG001196: Membrane protein YedZ low > 78
Klebsiella michiganensis M5al 0.73 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.74 BWI76_RS25520 sulfoxide reductase heme-binding subunit YedZ low > 92
Rahnella sp. WP5 0.52 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.69 EX31_RS12220 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 89
Pseudomonas putida KT2440 0.31 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.25 PP_4675 methionine sulfoxide reductase heme-binding subunit low > 96
Shewanella amazonensis SB2B 0.29 Sama_0762 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) 0.41 Sama_1892 putative sulfite oxidase subunit YedZ (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS16120 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.23 RR42_RS19055 sulfite oxidase low > 128
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.21 Pf6N2E2_5180 FIG001196: Membrane protein YedZ — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.24 Psyr_0851 Protein of unknown function UPF0191 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.24 Psyr_0851 Protein of unknown function UPF0191 — —
Pseudomonas stutzeri RCH2 0.28 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.26 Psest_1041 Predicted membrane protein low > 67
Shewanella loihica PV-4 0.27 Shew_0714 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) 0.34 Shew_2122 putative sulfite oxidase subunit YedZ (RefSeq) low > 60
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS04865 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.27 BPHYT_RS17935 sulfite oxidase low > 109
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4236 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.20 PfGW456L13_1543 FIG001196: Membrane protein YedZ low > 87
Ralstonia solanacearum UW163 0.27 UW163_RS09190 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.27 UW163_RS06620 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS04480 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.27 RALBFv3_RS06995 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 76
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.21 AO356_16195 sulfite oxidase low > 104
Shewanella sp. ANA-3 0.26 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) 0.36 Shewana3_2233 putative sulfite oxidase subunit YedZ (RefSeq) low > 73
Ralstonia solanacearum PSI07 0.26 RPSI07_RS12890 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.26 RPSI07_RS10245 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 81
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.22 AO353_14520 sulfite oxidase low > 101
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.21 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.21 PFLU_RS25625 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 109
Pseudomonas sp. RS175 0.25 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.23 PFR28_03694 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 88
Variovorax sp. OAS795 0.25 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.23 ABID97_RS23310 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Pseudomonas sp. S08-1 0.25 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.18 OH686_08100 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.1398.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.34 Xcc-8004.3285.1 FIG001196: Membrane protein YedZ low > 74
Shewanella oneidensis MR-1 0.25 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) 0.37 SO2043 conserved hypothetical protein (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.25 ABIE51_RS04975 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.36 ABIE51_RS12160 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 62
Pseudomonas simiae WCS417 0.24 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.24 PS417_23785 sulfite oxidase low > 88
Ralstonia solanacearum GMI1000 0.24 RS_RS12035 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.26 RS_RS14935 sulfoxide reductase heme-binding subunit YedZ — —
Variovorax sp. SCN45 0.23 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.22 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS09770 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.26 HSERO_RS15305 sulfite oxidase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3999 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 0.23 GFF1347 FIG001196: Membrane protein YedZ — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS00075 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.27 ABZR87_RS02645 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ low > 80
Azospirillum brasilense Sp245 0.19 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.28 AZOBR_RS29835 sulfite oxidase — —
Dinoroseobacter shibae DFL-12 0.19 Dshi_0788 Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) 0.29 Dshi_0624 Ferric reductase domain protein transmembrane component domain (RefSeq) — —
Sinorhizobium meliloti 1021 0.19 SMc04214 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.25 SMc01282 sulfite oxidase subunit YedZ — —
Agrobacterium fabrum C58 0.17 Atu1890 cobyrinic acid synthase 0.28 Atu1920 hypothetical protein — —
Magnetospirillum magneticum AMB-1 0.16 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.30 AMB_RS15450 sulfoxide reductase heme-binding subunit YedZ — —
Rhodospirillum rubrum S1H 0.13 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.24 Rru_A0594 Protein of unknown function UPF0191 (NCBI) low > 58

Not shown: 25 genomes with orthologs for b1991 only; 12 genomes with orthologs for b1972 only