Conservation of cofitness between b0683 and b0429 in Escherichia coli BW25113

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0683 fur ferric uptake regulator (NCBI) 1.0 b0429 cyoD cytochrome o ubiquinol oxidase subunit IV (NCBI) 0.41 17
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03032 Ferric uptake regulation protein 1.00 OHPLBJKB_03244 Cytochrome bo(3) ubiquinol oxidase subunit 4 low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03695 ferric iron uptake transcriptional regulator 0.95 ECOLIN_RS02580 cytochrome o ubiquinol oxidase subunit IV low > 52
Escherichia coli ECRC101 1.00 MCAODC_26345 fur ferric iron uptake transcriptional regulator 1.00 MCAODC_27600 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC101 1.00 OKFHMN_07130 fur ferric iron uptake transcriptional regulator 1.00 OKFHMN_08375 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC102 1.00 NIAGMN_05185 fur ferric iron uptake transcriptional regulator 1.00 NIAGMN_06430 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC62 1.00 BNILDI_21515 fur ferric iron uptake transcriptional regulator 1.00 BNILDI_22725 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC99 1.00 KEDOAH_20840 fur ferric iron uptake transcriptional regulator 1.00 KEDOAH_19590 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR38 1.00 HEPCGN_01095 fur ferric iron uptake transcriptional regulator 1.00 HEPCGN_06990 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECRC98 1.00 JDDGAC_10780 fur ferric iron uptake transcriptional regulator 1.00 JDDGAC_12030 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia coli ECOR27 1.00 NOLOHH_23510 fur ferric iron uptake transcriptional regulator 1.00 NOLOHH_01310 cyoD cytochrome o ubiquinol oxidase subunit III — —
Escherichia fergusonii Becca 1.00 EFB2_03411 Ferric uptake regulation protein 0.96 EFB2_03628 Cytochrome bo(3) ubiquinol oxidase subunit 4 — —
Escherichia coli BL21 1.00 ECD_00640 ferric iron uptake regulon transcriptional repressor; autorepressor 1.00 ECD_00380 cytochrome o ubiquinol oxidase subunit IV — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF4596 Ferric uptake regulation protein FUR 0.96 GFF4343 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) low > 78
Klebsiella michiganensis M5al 0.97 BWI76_RS08265 transcriptional repressor 0.81 BWI76_RS06480 cytochrome o ubiquinol oxidase subunit IV — —
Enterobacter sp. TBS_079 0.96 MPMX20_01329 Ferric uptake regulation protein 0.88 MPMX20_01020 Cytochrome bo(3) ubiquinol oxidase subunit 4 — —
Enterobacter asburiae PDN3 0.96 EX28DRAFT_2292 Fe2+/Zn2+ uptake regulation proteins 0.88 EX28DRAFT_2542 cytochrome o ubiquinol oxidase subunit IV — —
Dickeya dadantii 3937 0.91 DDA3937_RS06325 ferric iron uptake transcriptional regulator 0.68 DDA3937_RS05600 cytochrome o ubiquinol oxidase subunit IV — —
Dickeya dianthicola ME23 0.90 DZA65_RS06715 ferric iron uptake transcriptional regulator 0.68 DZA65_RS05970 cytochrome o ubiquinol oxidase subunit IV — —
Dickeya dianthicola 67-19 0.90 HGI48_RS06370 ferric iron uptake transcriptional regulator 0.68 HGI48_RS05645 cytochrome o ubiquinol oxidase subunit IV — —
Pantoea sp. MT58 0.90 IAI47_13860 ferric iron uptake transcriptional regulator 0.72 IAI47_14695 cytochrome o ubiquinol oxidase subunit IV — —
Pectobacterium carotovorum WPP14 0.89 HER17_RS15090 ferric iron uptake transcriptional regulator 0.67 HER17_RS15890 cytochrome o ubiquinol oxidase subunit IV — —
Serratia liquefaciens MT49 0.89 IAI46_06120 ferric iron uptake transcriptional regulator 0.69 IAI46_04970 cytochrome o ubiquinol oxidase subunit IV — —
Erwinia tracheiphila SCR3 0.89 LU632_RS16195 fur ferric iron uptake transcriptional regulator 0.65 LU632_RS18390 cytochrome o ubiquinol oxidase subunit IV — —
Rahnella sp. WP5 0.89 EX31_RS23290 ferric iron uptake transcriptional regulator 0.67 EX31_RS22205 cytochrome o ubiquinol oxidase subunit IV — —
Shewanella sp. ANA-3 0.75 Shewana3_1716 fur ferric uptake regulator (RefSeq) 0.39 Shewana3_4034 cytochrome C oxidase subunit IV (RefSeq) — —
Shewanella loihica PV-4 0.75 Shew_1661 fur ferric uptake regulator (RefSeq) 0.41 Shew_0369 cytochrome C oxidase subunit IV (RefSeq) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_02294 Ferric uptake regulation protein 0.40 MIT1002_03926 Cytochrome o ubiquinol oxidase protein CyoD — —
Acinetobacter radioresistens SK82 0.59 MPMX26_02407 Ferric uptake regulation protein 0.55 MPMX26_01159 Cytochrome bo(3) ubiquinol oxidase subunit 4 — —
Pseudomonas putida KT2440 0.53 PP_4730 ferric iron uptake global transcriptional repressor Fur-Fe+2 0.50 PP_0815 cytochrome bo terminal oxidase subunit IV — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_06316 ferric uptake regulator, Fur family 0.34 H281DRAFT_03429 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) — —
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS16810 Fur family transcriptional regulator 0.46 BPHYT_RS24930 cytochrome C oxidase subunit III — —
Paraburkholderia graminis OAS925 0.52 ABIE53_003531 Fur family ferric uptake transcriptional regulator 0.35 ABIE53_005343 cytochrome o ubiquinol oxidase operon protein cyoD — —
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS17560 Fur family transcriptional regulator 0.58 RR42_RS32585 cytochrome C oxidase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3432.1 Ferric uptake regulation protein FUR 0.47 Xcc-8004.3814.1 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS26980 ferric iron uptake transcriptional regulator 0.44 QEN71_RS15355 cytochrome o ubiquinol oxidase subunit IV — —
Lysobacter sp. OAE881 0.51 ABIE51_RS11660 ferric iron uptake transcriptional regulator 0.49 ABIE51_RS09780 cytochrome o ubiquinol oxidase subunit IV — —
Ralstonia solanacearum UW163 0.51 UW163_RS07770 ferric iron uptake transcriptional regulator 0.52 UW163_RS06980 cytochrome o ubiquinol oxidase subunit IV — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS05855 ferric iron uptake transcriptional regulator 0.52 RALBFv3_RS06645 cytochrome o ubiquinol oxidase subunit IV — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS01425 ferric iron uptake transcriptional regulator 0.55 ABZR87_RS02320 cytochrome o ubiquinol oxidase subunit IV low > 80
Ralstonia solanacearum PSI07 0.51 RPSI07_RS11445 ferric iron uptake transcriptional regulator 0.46 RPSI07_RS10580 cytochrome o ubiquinol oxidase subunit IV — —
Ralstonia solanacearum GMI1000 0.51 RS_RS13745 ferric iron uptake transcriptional regulator 0.53 RS_RS14595 cytochrome o ubiquinol oxidase subunit IV — —
Pseudomonas simiae WCS417 0.50 PS417_24075 Fur family transcriptional regulator 0.45 PS417_23375 cytochrome C oxidase — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS25915 ferric iron uptake transcriptional regulator 0.45 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS25915 ferric iron uptake transcriptional regulator 0.45 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV — —
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_07515 Fur family transcriptional regulator 0.48 AO356_16975 cytochrome C oxidase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_4198 Ferric-uptake regulator 0.42 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_4198 Ferric-uptake regulator 0.42 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_3371 Ferric uptake regulation protein FUR 0.48 Pf6N2E2_5320 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_5107 Ferric uptake regulation protein FUR 0.44 PfGW456L13_4933 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) — —
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1179 Ferric uptake regulation protein FUR 0.47 Pf1N1B4_970 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) — —
Pseudomonas sp. RS175 0.47 PFR28_00070 Ferric uptake regulation protein 0.48 PFR28_00245 Cytochrome bo(3) ubiquinol oxidase subunit 4 — —
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_05665 Fur family transcriptional regulator 0.45 AO353_15465 cytochrome C oxidase — —
Bosea sp. OAE506 0.33 ABIE41_RS08350 Fur family transcriptional regulator 0.44 ABIE41_RS21035 cytochrome o ubiquinol oxidase subunit IV low > 77
Agrobacterium fabrum C58 0.33 Atu0354 ferric uptake regulator 0.49 Atu0139 cytochrome o ubiquinol oxidase subunit IV — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00055 ferric uptake regulation protein 0.49 CCNA_01848 quinol cytochrome oxidase polypeptide IV — —
Caulobacter crescentus NA1000 0.33 CCNA_00055 ferric uptake regulation protein 0.49 CCNA_01848 quinol cytochrome oxidase polypeptide IV — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_1916 Fe2+/Zn2+ uptake regulation proteins 0.51 Ga0059261_1563 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS01005 Fur family transcriptional regulator 0.45 AZOBR_RS23165 cytochrome C oxidase subunit III — —

Not shown: 34 genomes with orthologs for b0683 only; 1 genomes with orthologs for b0429 only