Homologs of SMc00770 from Sinorhizobium meliloti 1021

putrescine-binding periplasmic protein
SEED: Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2)
KEGG: putrescine transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00770 putrescine-binding periplasmic protein sig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS03265 polyamine ABC transporter substrate-binding protein cofit 74 99
o Rhodopseudomonas palustris CGA009 TX73_010380 polyamine ABC transporter substrate-binding protein sig. 60 99
o Agrobacterium fabrum C58 Atu0609 ABC transporter, substrate binding protein (putrescine) sig. 61 99
o Xanthobacter sp. DMC5 GFF1739 Putrescine-binding periplasmic protein SpuD insig. 59 100
o Pseudomonas stutzeri RCH2 Psest_4284 Spermidine/putrescine-binding periplasmic protein strong 57 98
o Phaeobacter inhibens DSM 17395 PGA1_c34420 putrescine-binding periplasmic protein PotF sig. 57 92
o Pseudomonas sp. DMC3 GFF286 Spermidine-binding periplasmic protein SpuE cofit 55 99
  Pseudomonas stutzeri RCH2 Psest_4283 Spermidine/putrescine-binding periplasmic protein strong 57 93
o Shewanella amazonensis SB2B Sama_2642 polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) strong 56 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_929 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 54 97
o Rahnella sp. WP5 EX31_RS09630 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 53 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 52 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 52 99
o Bosea sp. OAE506 ABIE41_RS21650 polyamine ABC transporter substrate-binding protein insig. 55 93
o Pseudomonas sp. RS175 PFR28_04294 Spermidine-binding periplasmic protein SpuE insig. 51 99
o Pseudomonas sp. S08-1 OH686_11465 Putrescine ABC transporter putrescine-binding protein PotF cofit 55 93
o Pseudomonas fluorescens FW300-N2C3 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) strong 51 99
  Pseudomonas sp. S08-1 OH686_11460 Putrescine ABC transporter putrescine-binding protein PotF cofit 53 97
o Pseudomonas sp. BP01 JOY50_RS22345 polyamine ABC transporter substrate-binding protein insig. 52 99
o Dickeya dadantii 3937 DDA3937_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 52 99
o Pseudomonas syringae pv. syringae B728a Psyr_4864 extracellular solute-binding protein, family 1 insig. 54 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4864 extracellular solute-binding protein, family 1 insig. 54 93
o Shewanella sp. ANA-3 Shewana3_3097 extracellular solute-binding protein (RefSeq) strong 54 98
o Pseudomonas putida KT2440 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit sig. 52 99
o Pseudomonas aeruginosa PA14 IKLFDK_23955 Putrescine-binding periplasmic protein SpuD insig. 53 100
o Shewanella oneidensis MR-1 SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) strong 53 99
o Pectobacterium carotovorum WPP14 HER17_RS12500 spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 52 99
o Dickeya dianthicola ME23 DZA65_RS09790 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 52 99
o Enterobacter sp. TBS_079 MPMX20_01495 Putrescine-binding periplasmic protein strong 54 99
o Enterobacter asburiae PDN3 EX28DRAFT_2099 Spermidine/putrescine-binding periplasmic protein insig. 54 99
o Klebsiella pneumoniae MKP103 KDGMDA_17705 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 53 99
o Pseudomonas simiae WCS417 PS417_27120 ABC transporter substrate-binding protein sig. 51 99
o Klebsiella michiganensis M5al BWI76_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 52 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2206.1 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 53 99
o Dickeya dianthicola 67-19 HGI48_RS09480 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 51 99
o Erwinia amylovora T8 OLJFJH_16310 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 53 98
o Pseudomonas fluorescens SBW25 PFLU_RS28770 polyamine ABC transporter substrate-binding protein insig. 51 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28770 polyamine ABC transporter substrate-binding protein insig. 51 99
o Pseudomonas fluorescens FW300-N2E3 AO353_08575 ABC transporter substrate-binding protein strong 51 98
o Pseudomonas sp. SVBP6 COO64_RS00885 polyamine ABC transporter substrate-binding protein insig. 50 99
  Pseudomonas aeruginosa PA14 IKLFDK_23950 Spermidine-binding periplasmic protein SpuE insig. 52 99
  Pseudomonas fluorescens FW300-N2E3 AO353_24775 ABC transporter substrate-binding protein insig. 50 99
o Pantoea sp. MT58 IAI47_13045 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 53 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4513 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 52 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05564 Spermidine-binding periplasmic protein SpuE cofit 50 99
  Pseudomonas fluorescens FW300-N2E3 AO353_08580 spermidine/putrescine ABC transporter substrate-binding protein strong 52 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04285 spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 53 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_928 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 51 96
  Pseudomonas simiae WCS417 PS417_27125 spermidine/putrescine ABC transporter substrate-binding protein strong 51 96
  Pseudomonas syringae pv. syringae B728a Psyr_4865 extracellular solute-binding protein, family 1 insig. 51 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4865 extracellular solute-binding protein, family 1 insig. 51 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2259 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) sig. 51 99
o Rhodospirillum rubrum S1H Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) strong 53 94
o Escherichia coli BW25113 b0854 potF putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) sig. 51 99
  Pseudomonas sp. DMC3 GFF2732 Spermidine-binding periplasmic protein SpuE cofit 49 99
o Escherichia fergusonii Becca EFB2_03207 Putrescine-binding periplasmic protein insig. 50 99
o Escherichia coli BL21 ECD_00859 putrescine ABC transporter periplasmic binding protein insig. 50 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02814 Putrescine-binding periplasmic protein insig. 50 99
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05565 Putrescine-binding periplasmic protein SpuD cofit 51 96
o Escherichia coli ECRC100 OKFHMN_05960 potF spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 50 99
o Escherichia coli ECRC101 MCAODC_25175 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli ECRC102 NIAGMN_04005 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli ECRC98 JDDGAC_09595 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli ECRC99 KEDOAH_21950 potF spermidine/putrescine ABC transporter substrate-binding protein PotF no data 50 99
  Pseudomonas fluorescens FW300-N2C3 AO356_13155 spermidine/putrescine ABC transporter substrate-binding protein strong 51 99
o Escherichia coli ECOR27 NOLOHH_22330 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli ECOR38 HEPCGN_02070 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli ECRC62 BNILDI_20585 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
o Escherichia coli Nissle 1917 ECOLIN_RS04550 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
  Pseudomonas sp. RS175 PFR28_04295 Putrescine-binding periplasmic protein SpuD strong 51 96
o Shewanella loihica PV-4 Shew_0973 extracellular solute-binding protein (RefSeq) sig. 51 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF758 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 50 99
o Serratia liquefaciens MT49 IAI46_08370 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 50 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4349 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) sig. 50 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3222 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 48 99
  Pseudomonas fluorescens SBW25 PFLU_RS28775 polyamine ABC transporter substrate-binding protein strong 51 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28775 polyamine ABC transporter substrate-binding protein strong 51 96
  Pseudomonas simiae WCS417 PS417_11790 ABC transporter substrate-binding protein insig. 51 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4825 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 48 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02644 Spermidine-binding periplasmic protein SpuE cofit 49 97
  Pseudomonas sp. DMC3 GFF287 Putrescine-binding periplasmic protein SpuD cofit 50 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4895 Putrescine ABC transporter, periplasmic putrescine-binding protein insig. 50 99
  Pseudomonas fluorescens SBW25 PFLU_RS12535 polyamine ABC transporter substrate-binding protein insig. 49 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12535 polyamine ABC transporter substrate-binding protein insig. 49 99
  Pseudomonas putida KT2440 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit strong 52 94
  Pseudomonas sp. S08-1 OH686_13260 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) insig. 51 100
  Pseudomonas sp. SVBP6 COO64_RS00890 polyamine ABC transporter substrate-binding protein insig. 50 100
  Pseudomonas sp. BP01 JOY50_RS21610 polyamine ABC transporter substrate-binding protein insig. 52 93
  Pseudomonas putida KT2440 PP_3147 putrescine-binding periplasmic protein strong 51 93
o Marinobacter adhaerens HP15 HP15_940 putrescine ABC transporter, periplasmic putrescine-binding protein cofit 49 99
  Pseudomonas simiae WCS417 PS417_13430 spermidine/putrescine ABC transporter substrate-binding protein insig. 51 93
  Pseudomonas sp. DMC3 GFF1624 Putrescine-binding periplasmic protein SpuD cofit 49 99
  Pseudomonas sp. SVBP6 COO64_RS20190 polyamine ABC transporter substrate-binding protein insig. 47 98
  Pseudomonas sp. BP01 JOY50_RS22350 polyamine ABC transporter substrate-binding protein insig. 51 94
  Pseudomonas fluorescens FW300-N2C3 AO356_29815 spermidine/putrescine ABC transporter substrate-binding protein insig. 50 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1770 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 50 93
  Pseudomonas putida KT2440 PP_5341 putrescine-binding periplasmic protein insig. 50 99
  Pseudomonas sp. SVBP6 COO64_RS01785 polyamine ABC transporter substrate-binding protein insig. 49 100
  Pseudomonas fluorescens SBW25 PFLU_RS15360 polyamine ABC transporter substrate-binding protein insig. 51 93