Homologs of Psyr_2887 from Pseudomonas syringae pv. syringae B728a

Endoribonuclease L-PSP
SEED: RidA/YER057c/UK114 superfamily, group 3
KEGG: TdcF protein

66 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_2887 Endoribonuclease L-PSP sig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2887 Endoribonuclease L-PSP insig. 100 100
o Pseudomonas orientalis W4I3 QF045_RS19410 RidA family protein insig. 87 98
o Pseudomonas fluorescens SBW25 PFLU_RS19860 hypothetical protein insig. 91 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19860 hypothetical protein no data 91 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03861 2-aminomuconate deaminase no data 85 100
o Pseudomonas sp. BP01 JOY50_RS04530 RidA family protein no data 68 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19400 RidA family protein insig. 52 92
  Pseudomonas sp. BP01 JOY50_RS11315 RidA family protein insig. 44 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1124.1 RidA/YER057c/UK114 superfamily, group 3 insig. 47 92
  Caulobacter crescentus NA1000 CCNA_01143 endoribonuclease L-PSP strong 41 89
  Caulobacter crescentus NA1000 Δfur CCNA_01143 endoribonuclease L-PSP cofit 41 89
o Azospirillum sp. SherDot2 MPMX19_03874 hypothetical protein insig. 39 87
  Cupriavidus basilensis FW507-4G11 RR42_RS35205 translation initiation inhibitor insig. 38 73
o Serratia liquefaciens MT49 IAI46_05760 RidA family protein insig. 36 92
  Cupriavidus basilensis FW507-4G11 RR42_RS05085 2-aminomuconate deaminase strong 34 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 38 89
o Burkholderia phytofirmans PsJN BPHYT_RS07260 2-aminomuconate deaminase no data 32 92
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 38 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU2203 endoribonuclease, L-PSP family (TIGR) sig. 37 80
  Synechococcus elongatus PCC 7942 Synpcc7942_0972 YjgF-like protein strong 34 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 37 88
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 36 88
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 36 88
  Synechocystis sp000284455 PCC 6803 SGL_RS16325 RidA family protein strong 29 99
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 34 88
  Cupriavidus basilensis FW507-4G11 RR42_RS05130 2-aminomuconate deaminase insig. 30 88
  Rhodanobacter sp. FW510-T8 OKGIIK_09640 ridA 2-aminomuconate deaminase insig. 29 100
  Desulfovibrio vulgaris Miyazaki F DvMF_1512 endoribonuclease L-PSP (RefSeq) no data 36 84
  Kangiella aquimarina DSM 16071 B158DRAFT_0030 Putative translation initiation inhibitor, yjgF family insig. 31 91
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 35 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 35 78
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 35 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 35 78
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 35 78
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 35 78
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 35 78
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 35 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19620 2-aminomuconate deaminase sig. 31 91
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 33 78
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 33 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 33 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4209 Translation initiation inhibitor insig. 29 95
  Pseudomonas aeruginosa MRSN321 DY961_RS12585 RidA family protein strong 33 78
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase strong 33 78
  Pseudomonas aeruginosa PUPa3 DQ20_RS49540 RidA family protein strong 33 78
  Lysobacter sp. OAE881 ABIE51_RS12665 RidA family protein cofit 30 98
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 32 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 32 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 32 78
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 32 78
  Alteromonas macleodii MIT1002 MIT1002_00109 Putative reactive intermediate deaminase TdcF strong 27 99
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 33 78
  Rhodopseudomonas palustris CGA009 TX73_018610 RidA family protein insig. 33 80
  Alteromonas macleodii MIT1002 MIT1002_03466 Putative aminoacrylate peracid reductase RutC insig. 26 88
  Pseudomonas segetis P6 MPMX49_00037 2-iminobutanoate/2-iminopropanoate deaminase strong 32 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 29 88
  Acinetobacter radioresistens SK82 MPMX26_01719 Putative aminoacrylate peracid reductase RutC no data 29 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS05790 RidA family protein insig. 32 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14370 hypothetical protein strong 30 67
  Pantoea sp. MT58 IAI47_12520 pyrimidine utilization protein C insig. 26 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04810 pyrimidine utilization protein C cofit 26 79
  Pseudomonas fluorescens FW300-N2C3 AO356_22385 enamine deaminase RidA insig. 30 83
  Ralstonia solanacearum GMI1000 RS_RS23495 RidA family protein no data 31 85
  Ralstonia solanacearum GMI1000 RS_RS23625 RidA family protein no data 31 85
  Pectobacterium carotovorum WPP14 HER17_RS18785 RidA family protein insig. 27 91