| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_797 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_27730 | | ATP-dependent DNA ligase | insig. | 90 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_01701 | | Multifunctional non-homologous end joining protein LigD | insig. | 79 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS16850 | | DNA ligase D | insig. | 64 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03237 | | Multifunctional non-homologous end joining protein LigD | cofit | 64 | 96 |
| | Pseudomonas simiae WCS417 | PS417_13125 | | ATP-dependent DNA ligase | insig. | 62 | 100 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14185 | | DNA ligase D | insig. | 64 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14185 | | DNA ligase D | insig. | 64 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | insig. | 62 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | insig. | 62 | 97 |
| | Pseudomonas sp. S08-1 | OH686_01425 | | DNA ligase D | cofit | 60 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_2179 | | DNA ligase D | insig. | 53 | 95 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS08115 | | DNA ligase D | insig. | 52 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4314 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 49 | 97 |
| | Pseudomonas sp. DMC3 | GFF1659 | | Multifunctional non-homologous end joining protein LigD | cofit | 49 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26950 | | ATP-dependent DNA ligase | insig. | 50 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS21105 | | DNA ligase D | insig. | 52 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39205 | ligD;go_process=double-strand | DNA ligase D | insig. | 53 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10445 | | DNA ligase D | sig. | 53 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02106 | | Multifunctional non-homologous end joining protein LigD | insig. | 48 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS16935 | ligD;go_process=double-strand | DNA ligase D | insig. | 53 | 95 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1216 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 48 | 98 |
| | Pseudomonas putida KT2440 | PP_3260 | | DNA ligase D | insig. | 49 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS26485 | ligD | DNA ligase D | insig. | 49 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS24640 | ligD | DNA ligase D | insig. | 49 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS22145 | | DNA ligase D | insig. | 47 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_002080 | | bifunctional non-homologous end joining protein LigD | insig. | 46 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09215 | | ATP-dependent DNA ligase | insig. | 47 | 96 |
| | Variovorax sp. SCN45 | GFF6242 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 48 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06196 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 46 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_000212 | | bifunctional non-homologous end joining protein LigD | insig. | 43 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF111 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 44 | 93 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS37085 | | ATP-dependent DNA ligase | insig. | 44 | 94 |
| | Bosea sp. OAE506 | ABIE41_RS04575 | | DNA ligase D | insig. | 40 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS11360 | | DNA ligase | insig. | 39 | 95 |
| | Xanthobacter sp. DMC5 | GFF242 | | Multifunctional non-homologous end joining protein LigD | insig. | 38 | 94 |
| | Rhizobium sp. OAE497 | ABIE40_RS26435 | | DNA ligase D | insig. | 39 | 93 |
| | Agrobacterium fabrum C58 | Atu5055 | | ATP-dependent DNA ligase | insig. | 38 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS29525 | | DNA ligase D | insig. | 39 | 90 |
| | Sinorhizobium meliloti 1021 | SMc03959 | | hypothetical protein | insig. | 38 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS06605 | | DNA ligase D | insig. | 37 | 96 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3858 | | DNA ligase D | insig. | 36 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS28460 | | DNA ligase D | insig. | 37 | 93 |
| | Sphingobium sp. HT1-2 | GFF5134 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | cofit | 35 | 94 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10580 | | DNA ligase D | insig. | 37 | 91 |
| | Rhodopseudomonas palustris CGA009 | TX73_018915 | | DNA ligase D | insig. | 35 | 90 |
| | Agrobacterium fabrum C58 | Atu4632 | | ATP-dependent DNA ligase | insig. | 37 | 87 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02935 | | DNA ligase D | insig. | 36 | 97 |
| | Pseudomonas stutzeri RCH2 | Psest_2150 | | DNA polymerase LigD, polymerase domain | insig. | 55 | 46 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00864 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 54 | 46 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2247.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 32 | 97 |
| | Sinorhizobium meliloti 1021 | SM_b20685 | | hypothetical protein | insig. | 35 | 92 |
| | Lysobacter sp. OAE881 | ABIE51_RS12760 | | DNA ligase D | insig. | 33 | 92 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06915 | | DNA ligase D | insig. | 30 | 93 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20470 | | DNA ligase D | insig. | 30 | 93 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15285 | | DNA ligase D | insig. | 29 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00864 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 43 | 51 |
| | Sinorhizobium meliloti 1021 | SM_b21044 | | ATP-dependent DNA ligase | insig. | 32 | 88 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01670 | | DNA polymerase domain-containing protein | insig. | 42 | 44 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.140.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 39 | 47 |
| | Lysobacter sp. OAE881 | ABIE51_RS12790 | | non-homologous end-joining DNA ligase | insig. | 40 | 42 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS09920 | | non-homologous end-joining DNA ligase | insig. | 35 | 51 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.140.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 39 | 48 |
| | Agrobacterium fabrum C58 | Atu6090 | | ATP-dependent DNA ligase | insig. | 36 | 45 |
| | Bosea sp. OAE506 | ABIE41_RS06590 | | non-homologous end-joining DNA ligase | insig. | 37 | 46 |
| | Agrobacterium fabrum C58 | Atu5097 | | ATP-dependent DNA ligase | insig. | 34 | 47 |
| | Agrobacterium fabrum C58 | Atu5051 | | ATP-dependent DNA ligase | insig. | 34 | 46 |
| | Rhizobium sp. OAE497 | ABIE40_RS27965 | | non-homologous end-joining DNA ligase | insig. | 36 | 45 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01036 | | DNA ligase D, ligase domain-containing protein | no data | 43 | 36 |
| | Sinorhizobium meliloti 1021 | SMa0414 | | hypothetical protein | insig. | 35 | 43 |
| | Sinorhizobium meliloti 1021 | SMa0424 | | ATP-dependent DNA ligase | insig. | 35 | 48 |
| | Sinorhizobium meliloti 1021 | SM_b20912 | | ATP-dependent DNA ligase | insig. | 35 | 49 |
| | Mycobacterium tuberculosis H37Rv | Rv0938 | | ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) | insig. | 33 | 47 |
| | Mycobacterium tuberculosis H37Rv | Rv3730c | | Conserved hypothetical protein | insig. | 33 | 42 |
| | Mycobacterium tuberculosis H37Rv | Rv0269c | | Conserved hypothetical protein | insig. | 31 | 42 |
| | Mycobacterium tuberculosis H37Rv | Rv0938 | | ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) | insig. | 30 | 40 |
| | Sinorhizobium meliloti 1021 | SMa0417 | | hypothetical protein | insig. | 42 | 18 |
| | Variovorax sp. OAS795 | ABID97_RS09860 | | RNA ligase family protein | insig. | 37 | 25 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19200 | | hypothetical protein | insig. | 37 | 14 |
| | Sinorhizobium meliloti 1021 | SMa0417 | | hypothetical protein | insig. | 39 | 14 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS43605 | | DNA ligase | insig. | 27 | 26 |
| | Lysobacter sp. OAE881 | ABIE51_RS03755 | | ATP-dependent DNA ligase | insig. | 28 | 37 |
| | Mycobacterium tuberculosis H37Rv | Rv3062 | | Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) | insig. | 26 | 35 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04120 | | cisplatin damage response ATP-dependent DNA ligase | insig. | 27 | 37 |
| | Methanococcus maripaludis S2 | MMP_RS05025 | | ATP-dependent DNA ligase | no data | 23 | 36 |
| | Alteromonas macleodii MIT1002 | MIT1002_03768 | | Putative DNA ligase-like protein/MT0965 | insig. | 27 | 26 |
| | Caulobacter crescentus NA1000 | CCNA_03725 | | ATP-dependent DNA ligase | cofit | 26 | 38 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03725 | | ATP-dependent DNA ligase | cofit | 26 | 38 |
| | Xanthobacter sp. DMC5 | GFF150 | | DNA ligase | insig. | 25 | 43 |
| | Mycobacterium tuberculosis H37Rv | Rv3731 | | Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) | insig. | 26 | 37 |
| | Sinorhizobium meliloti 1021 | SM_b20008 | | ATP-dependent DNA ligase | insig. | 30 | 31 |