Homologs of Pf6N2E2_2079 from Pseudomonas fluorescens FW300-N2E2

HTH-type transcriptional regulator hdfR
SEED: HTH-type transcriptional regulator hdfR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR sig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_00585 LysR family transcriptional regulator insig. 100 100
o Pseudomonas sp. RS175 PFR28_01360 HTH-type transcriptional regulator HdfR insig. 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_22745 LysR family transcriptional regulator sig. 88 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2837 HTH-type transcriptional regulator hdfR insig. 86 100
o Pseudomonas sp. DMC3 GFF3699 HTH-type transcriptional regulator HdfR insig. 83 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03820 HTH-type transcriptional regulator HdfR cofit 81 100
o Pseudomonas fluorescens SBW25 PFLU_RS19485 LysR family transcriptional regulator insig. 81 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19485 LysR family transcriptional regulator insig. 81 100
o Pseudomonas orientalis W4I3 QF045_RS19205 LysR family transcriptional regulator insig. 80 100
o Pseudomonas simiae WCS417 PS417_17700 LysR family transcriptional regulator insig. 80 100
o Pseudomonas sp. SVBP6 COO64_RS07955 LysR family transcriptional regulator insig. 73 100
o Pseudomonas aeruginosa PA14 IKLFDK_09025 LysR family transcriptional regulator insig. 73 99
o Pseudomonas putida KT2440 PP_2350 LysR family transcriptional regulator sig. 73 100
o Pseudomonas aeruginosa MRSN321 DY961_RS21010 LysR family transcriptional regulator insig. 73 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS55080 LysR family transcriptional regulator insig. 73 99
o Pseudomonas sp. BP01 JOY50_RS10870 LysR family transcriptional regulator insig. 73 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5672 HTH-type transcriptional regulator hdfR insig. 85 78
o Pseudomonas stutzeri RCH2 Psest_0802 Transcriptional regulator sig. 67 99
o Variovorax sp. OAS795 ABID97_RS24430 LysR family transcriptional regulator insig. 49 95
o Magnetospirillum magneticum AMB-1 AMB_RS21960 LysR family transcriptional regulator insig. 46 89
o Sinorhizobium meliloti 1021 SMc02596 transcriptional regulator insig. 47 94
o Azospirillum sp. SherDot2 MPMX19_03737 HTH-type transcriptional regulator HdfR insig. 43 95
o Dinoroseobacter shibae DFL-12 Dshi_2990 transcriptional regulator, LysR family (RefSeq) insig. 38 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_19195 LysR family transcriptional regulator insig. 32 90
  Sinorhizobium meliloti 1021 SMa1736 LysR family transcriptional regulator insig. 31 90
o Shewanella loihica PV-4 Shew_2897 LysR family transcriptional regulator (RefSeq) strong 31 100
o Dickeya dianthicola 67-19 HGI48_RS20335 HTH-type transcriptional regulator HdfR strong 30 96
o Dickeya dianthicola ME23 DZA65_RS21375 HTH-type transcriptional regulator HdfR cofit 30 96
o Dickeya dadantii 3937 DDA3937_RS20190 HTH-type transcriptional regulator HdfR insig. 30 96
o Shewanella oneidensis MR-1 SO2202 transcriptional regulator, LysR family (NCBI ptt file) strong 30 90
o Shewanella sp. ANA-3 Shewana3_2403 LysR family transcriptional regulator (RefSeq) strong 30 90
o Shewanella amazonensis SB2B Sama_1997 LysR family transcriptional regulator (RefSeq) strong 28 90
o Pectobacterium carotovorum WPP14 HER17_RS01040 HTH-type transcriptional regulator HdfR sig. 29 96
o Serratia liquefaciens MT49 IAI46_24385 HTH-type transcriptional regulator HdfR insig. 29 91
  Sinorhizobium meliloti 1021 SMc01664 transcriptional regulator insig. 29 77
o Rahnella sp. WP5 EX31_RS14970 HTH-type transcriptional regulator HdfR insig. 29 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2907 HTH-type transcriptional regulator hdfR strong 30 91
o Pantoea sp. MT58 IAI47_01000 HTH-type transcriptional regulator HdfR strong 29 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20965 HTH-type transcriptional regulator HdfR strong 29 91
o Klebsiella michiganensis M5al BWI76_RS00940 transcriptional regulator HdfR strong 27 95
o Escherichia coli BL21 ECD_03642 flhDC operon transcriptional repressor strong 29 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04288 HTH-type transcriptional regulator HdfR strong 29 91
o Escherichia coli BW25113 b4480 hdfR transcriptional regulator HdfR (NCBI) strong 29 91
o Escherichia fergusonii Becca EFB2_04871 HTH-type transcriptional regulator HdfR strong 29 91
o Escherichia coli Nissle 1917 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR strong 29 91
o Klebsiella pneumoniae MKP103 KDGMDA_09455 HTH-type transcriptional regulator HdfR sig. 27 95
o Escherichia coli ECOR27 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR strong 28 91
o Escherichia coli ECRC100 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR cofit 28 91
o Escherichia coli ECRC101 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR cofit 28 91
o Escherichia coli ECRC102 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR cofit 28 91
o Escherichia coli ECRC62 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR cofit 28 91
o Escherichia coli ECRC98 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR strong 28 91
o Escherichia coli ECRC99 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR no data 28 91
o Erwinia tracheiphila SCR3 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR strong 29 95
o Escherichia coli ECOR38 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR cofit 28 91
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_09295 hdfR HTH-type transcriptional regulator HdfR strong 29 95
  Erwinia amylovora T8 OLJFJH_06200 HTH-type transcriptional regulator HdfR strong 32 66
o Enterobacter asburiae PDN3 EX28DRAFT_4436 Transcriptional regulator strong 28 90
o Enterobacter sp. TBS_079 MPMX20_04505 HTH-type transcriptional regulator HdfR strong 28 90
o Alteromonas macleodii MIT1002 MIT1002_02368 HTH-type transcriptional activator AllS cofit 28 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF785 Transcriptional regulator ligR, LysR family insig. 34 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS39320 LysR substrate-binding domain-containing protein insig. 32 57
  Cupriavidus basilensis FW507-4G11 RR42_RS30590 LysR family transcriptional regulator insig. 31 68
  Acinetobacter radioresistens SK82 MPMX26_00849 HTH-type transcriptional regulator GltC insig. 30 58
  Dinoroseobacter shibae DFL-12 Dshi_3151 transcriptional regulator, LysR family (RefSeq) insig. 38 43
  Paraburkholderia sabiae LMG 24235 QEN71_RS30475 LysR family transcriptional regulator insig. 29 58
  Cellulophaga baltica 18 M666_RS17110 LysR substrate-binding domain-containing protein insig. 24 58
  Variovorax sp. OAS795 ABID97_RS01235 LysR family transcriptional regulator insig. 31 56
  Herbaspirillum seropedicae SmR1 HSERO_RS05570 LysR family transcriptional regulator insig. 30 55
  Herbaspirillum seropedicae SmR1 HSERO_RS19620 LysR family transcriptional regulator insig. 31 58
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2141 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 30 58
  Pseudomonas sp. BP01 JOY50_RS13700 LysR family transcriptional regulator insig. 26 64
  Pseudomonas sp. RS175 PFR28_01891 HTH-type transcriptional regulator GltR strong 28 52
  Variovorax sp. OAS795 ABID97_RS27255 LysR substrate-binding domain-containing protein insig. 31 60
  Dickeya dadantii 3937 DDA3937_RS18780 LysR family transcriptional regulator insig. 30 56
  Sphingobium sp. HT1-2 GFF355 Transcriptional regulator Swit_0960, LysR family cofit 30 82
  Variovorax sp. OAS795 ABID97_RS22410 LysR substrate-binding domain-containing protein insig. 29 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS37580 LysR family transcriptional regulator insig. 29 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5605 TcuR: regulates tcuABC genes used in utilization of tricarballylate insig. 31 58
  Dickeya dianthicola 67-19 HGI48_RS18765 LysR family transcriptional regulator insig. 30 56
  Dickeya dianthicola ME23 DZA65_RS19900 LysR family transcriptional regulator insig. 30 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02343 HTH-type transcriptional regulator TsaR insig. 28 60
  Escherichia coli BW25113 b1339 abgR predicted DNA-binding transcriptional regulator (NCBI) insig. 28 60
  Pseudomonas fluorescens FW300-N2E3 AO353_15120 hypothetical protein insig. 26 94
  Pseudomonas sp. SVBP6 COO64_RS15760 LysR family transcriptional regulator insig. 31 58
  Escherichia coli BL21 ECD_01316 putative DNA-binding transcriptional regulator of abgABT operon no data 28 60
  Escherichia coli ECRC100 OKFHMN_02200 abgR LysR family transcriptional regulator insig. 28 60
  Escherichia coli ECRC101 MCAODC_16055 abgR LysR family transcriptional regulator insig. 28 60
  Escherichia coli ECRC102 NIAGMN_26370 abgR LysR family transcriptional regulator cofit 28 60
  Escherichia coli ECRC98 JDDGAC_04760 abgR LysR family transcriptional regulator insig. 28 60
  Escherichia coli ECRC99 KEDOAH_26555 abgR LysR family transcriptional regulator no data 28 60
  Pseudomonas sp. SVBP6 COO64_RS04645 LysR family transcriptional regulator insig. 32 69
  Variovorax sp. OAS795 ABID97_RS18700 LysR substrate-binding domain-containing protein insig. 30 58
  Escherichia coli ECOR38 HEPCGN_07455 cynR transcriptional regulator CynR insig. 30 64
  Pseudomonas syringae pv. syringae B728a Psyr_3156 transcriptional regulator, LysR family insig. 30 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3156 transcriptional regulator, LysR family sig. 30 61
  Agrobacterium fabrum C58 Atu0873 transcriptional regulator, LysR family insig. 29 58
  Klebsiella michiganensis M5al BWI76_RS11035 putative LysR-family transcriptional regulator insig. 39 36
  Escherichia coli ECRC62 BNILDI_23155 cynR transcriptional regulator CynR insig. 30 64