Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5851 | | Transcriptional regulator, RpiR family | insig. | 100 | 100 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_27890 | | RpiR family transcriptional regulator | strong | 88 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_01500 | | RpiR family transcriptional regulator | strong | 84 | 100 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2175 | | Transcriptional regulator, RpiR family | strong | 83 | 100 |
o | Pseudomonas sp. RS175 | PFR28_01273 | | hypothetical protein | cofit | 83 | 100 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS26180 | | hypothetical protein | insig. | 41 | 94 |
o | Rhizobium sp. OAE497 | ABIE40_RS20155 | | MurR/RpiR family transcriptional regulator | cofit | 40 | 96 |
o | Sinorhizobium meliloti 1021 | SMc02353 | | hypothetical protein | insig. | 35 | 89 |
| Sinorhizobium meliloti 1021 | SMc01602 | | hypothetical protein | insig. | 31 | 89 |
| Rhizobium sp. OAE497 | ABIE40_RS12055 | | MurR/RpiR family transcriptional regulator | sig. | 31 | 91 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c27130 | | putative HTH-type transcriptional regulator | strong | 33 | 98 |
| Rhizobium sp. OAE497 | ABIE40_RS21085 | | MurR/RpiR family transcriptional regulator | strong | 35 | 84 |
o | Agrobacterium fabrum C58 | Atu2145 | | transcriptional regulator, RpiR family | sig. | 30 | 91 |
o | Variovorax sp. SCN45 | GFF2285 | | Transcriptional regulator, RpiR family | insig. | 32 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26890 | | RpiR family transcriptional regulator | insig. | 30 | 94 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_1959 | | Transcriptional regulator, RpiR family | insig. | 29 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02617 | | transcriptional regulator, RpiR family | insig. | 32 | 95 |
| Variovorax sp. SCN45 | GFF6654 | | Transcriptional regulator, RpiR family | insig. | 28 | 90 |
| Pseudomonas sp. S08-1 | OH686_23395 | | hypothetical protein | strong | 27 | 87 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17585 | | DNA-binding protein | no data | 26 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16875 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 91 |
| Pantoea sp. MT58 | IAI47_01475 | | MurR/RpiR family transcriptional regulator | strong | 25 | 85 |
| Sinorhizobium meliloti 1021 | SM_b20276 | | transcriptional regulator | insig. | 28 | 94 |
| Serratia liquefaciens MT49 | IAI46_24010 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 85 |
o | Dickeya dianthicola 67-19 | HGI48_RS16735 | | SIS domain-containing protein | cofit | 30 | 85 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10985 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 89 |
o | Rahnella sp. WP5 | EX31_RS21125 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26840 | | DNA-binding protein | strong | 28 | 81 |
| Ralstonia solanacearum PSI07 | RPSI07_RS14095 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 90 |
| Bosea sp. OAE506 | ABIE41_RS16720 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 80 |
o | Dickeya dianthicola ME23 | DZA65_RS17825 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 85 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17530 | | RpiR family transcriptional regulator | strong | 29 | 85 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27175 | | DNA-binding protein | insig. | 28 | 89 |
| Pectobacterium carotovorum WPP14 | HER17_RS06060 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 76 |
| Erwinia amylovora T8 | OLJFJH_04440 | | MurR/RpiR family transcriptional regulator | strong | 24 | 85 |
| Klebsiella michiganensis M5al | BWI76_RS14460 | | MurR/RpiR family transcriptional regulator | strong | 26 | 99 |
o | Alteromonas macleodii MIT1002 | MIT1002_01597 | | putative DNA-binding transcriptional regulator | cofit | 27 | 90 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_27995 | | RpiR family transcriptional regulator | strong | 25 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05904 | | transcriptional regulator, RpiR family | no data | 28 | 89 |
| Burkholderia phytofirmans PsJN | BPHYT_RS15550 | | transcriptional regulator | sig. | 29 | 86 |
| Klebsiella michiganensis M5al | BWI76_RS03080 | | (Fe-S)-cluster assembly protein | strong | 24 | 86 |
| Paraburkholderia graminis OAS925 | ABIE53_005821 | | DNA-binding MurR/RpiR family transcriptional regulator | strong | 28 | 89 |
| Acidovorax sp. GW101-3H11 | Ac3H11_692 | | transcriptional regulator, RpiR family | insig. | 30 | 77 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS22900 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 84 |
| Dickeya dianthicola 67-19 | HGI48_RS03725 | | SIS domain-containing protein | sig. | 25 | 88 |
| Enterobacter sp. TBS_079 | MPMX20_03402 | | hypothetical protein | insig. | 28 | 76 |
| Dickeya dadantii 3937 | DDA3937_RS03665 | | MurR/RpiR family transcriptional regulator | sig. | 24 | 88 |
| Pectobacterium carotovorum WPP14 | HER17_RS04535 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 85 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12105 | | RpiR family transcriptional regulator | strong | 25 | 88 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_01085 | | MurR/RpiR family transcriptional regulator | insig. | 30 | 65 |
| Rahnella sp. WP5 | EX31_RS01205 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 67 |
| Enterobacter sp. TBS_079 | MPMX20_03376 | | HTH-type transcriptional regulator MurR | strong | 25 | 84 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3704 | | Transcriptional regulator RpiR in protein degradation cluster | strong | 26 | 92 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4395 | | Transcriptional regulator RpiR in protein degradation cluster | no data | 26 | 92 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0119 | | transcriptional regulator, RpiR family | insig. | 29 | 76 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS09180 | | transcriptional regulator | insig. | 25 | 87 |
| Dickeya dianthicola ME23 | DZA65_RS03850 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 88 |
| Erwinia tracheiphila SCR3 | LU632_RS02360 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 84 |
| Variovorax sp. OAS795 | ABID97_RS15420 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 87 |
| Escherichia fergusonii Becca | EFB2_04493 | | HTH-type transcriptional regulator RpiR | insig. | 24 | 76 |
| Escherichia coli ECOR27 | NOLOHH_04970 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 24 | 76 |
| Escherichia coli ECOR38 | HEPCGN_11340 | alsR | als operon DNA-binding transcriptional repressor AlsR | insig. | 24 | 76 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23685 | | D-allose utilization transcriptional regulator AlsR | insig. | 24 | 76 |
| Escherichia coli BW25113 | b4089 | rpiR | transcriptional repressor of rpiB expression (VIMSS) | strong | 24 | 76 |
| Pectobacterium carotovorum WPP14 | HER17_RS14445 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 87 |
| Escherichia coli BL21 | ECD_03961 | | d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR | insig. | 24 | 76 |
| Pantoea sp. MT58 | IAI47_19420 | | MurR/RpiR family transcriptional regulator | insig. | 25 | 65 |
| Variovorax sp. SCN45 | GFF1217 | | Transcriptional regulator RpiR in protein degradation cluster | insig. | 25 | 87 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS12005 | | transcriptional regulator | insig. | 24 | 86 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18180 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 80 |
| Ralstonia solanacearum UW163 | UW163_RS20950 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 80 |
| Castellaniella sp019104865 MT123 | ABCV34_RS13380 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 88 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS19110 | | MurR/RpiR family transcriptional regulator | sig. | 28 | 78 |
| Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 26 | 89 |
| Fusobacterium nucleatum SB010 | HUW76_09985 | | MurR/RpiR family transcriptional regulator | cofit | 19 | 86 |
| Ralstonia solanacearum PSI07 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | insig. | 29 | 80 |
| Agrobacterium fabrum C58 | Atu5063 | | RpiR family transcriptional regulator | insig. | 26 | 76 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0146 | | transcriptional regulator, RpiR family | insig. | 24 | 84 |
| Serratia liquefaciens MT49 | IAI46_04245 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 82 |
| Serratia liquefaciens MT49 | IAI46_02300 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 86 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12065 | | MurR/RpiR family transcriptional regulator | strong | 23 | 94 |
| Paraburkholderia graminis OAS925 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | strong | 25 | 93 |
| Enterobacter sp. TBS_079 | MPMX20_00309 | | HTH-type transcriptional regulator RpiR | strong | 24 | 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF883 | | Predicted transcriptional regulator of the myo-inositol catabolic operon | strong | 24 | 84 |
| Dickeya dadantii 3937 | DDA3937_RS16665 | | MurR/RpiR family transcriptional regulator | sig. | 30 | 85 |
| Ralstonia solanacearum GMI1000 | RS_RS22855 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 80 |
| Ralstonia solanacearum GMI1000 | RS_RS06260 | | MurR/RpiR family transcriptional regulator | no data | 24 | 79 |
o | Pseudomonas putida KT2440 | PP_3592 | | Transcriptional regulator, RpiR family | strong | 24 | 91 |
| Burkholderia phytofirmans PsJN | BPHYT_RS24260 | | RpiR family transcriptional regulator | insig. | 21 | 93 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11800 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 94 |
| Castellaniella sp019104865 MT123 | ABCV34_RS13500 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 89 |
| Escherichia coli ECRC62 | BNILDI_12685 | murR | HTH-type transcriptional regulator MurR | cofit | 25 | 76 |
| Klebsiella michiganensis M5al | BWI76_RS02170 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 76 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1118 | | transcriptional regulator, RpiR family | insig. | 23 | 85 |
| Rahnella sp. WP5 | EX31_RS07935 | | MurR/RpiR family transcriptional regulator | insig. | 28 | 88 |
| Escherichia coli Nissle 1917 | ECOLIN_RS17460 | | MurR/RpiR family transcriptional regulator | cofit | 24 | 77 |
| Paraburkholderia graminis OAS925 | ABIE53_003274 | | DNA-binding MurR/RpiR family transcriptional regulator | insig. | 28 | 86 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_08905 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 77 |
| Escherichia coli BW25113 | b2427 | yfeT | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 25 | 76 |
| Escherichia fergusonii Becca | EFB2_00784 | | hypothetical protein | insig. | 25 | 67 |