Homologs of PP_3452 from Pseudomonas putida KT2440

GGDEF domain protein
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3452 GGDEF domain protein insig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2860 hypothetical protein insig. 53 97
o Pseudomonas sp. DMC3 GFF3675 hypothetical protein insig. 53 97
o Pseudomonas orientalis W4I3 QF045_RS13395 GGDEF domain-containing protein cofit 31 95
  Variovorax sp. SCN45 GFF1035 no description insig. 34 71
  Herbaspirillum seropedicae SmR1 HSERO_RS16115 hypothetical protein sig. 41 48
  Shewanella amazonensis SB2B Sama_2887 GGDEF domain-containing protein (RefSeq) insig. 41 42
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3798 diguanylate cyclase (GGDEF) domain insig. 41 44
  Pseudomonas fluorescens SBW25 PFLU_RS11595 GGDEF domain-containing protein insig. 32 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11595 GGDEF domain-containing protein insig. 32 72
  Pseudomonas syringae pv. syringae B728a Psyr_1684 GGDEF domain protein cofit 30 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1684 GGDEF domain protein insig. 30 63
  Burkholderia phytofirmans PsJN BPHYT_RS28910 diguanylate phosphodiesterase insig. 30 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01379 diguanylate cyclase/phosphodiesterase insig. 29 95
  Escherichia coli Nissle 1917 ECOLIN_RS05345 GGDEF domain-containing protein insig. 39 46
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16460 GGDEF domain-containing protein insig. 32 73
  Rhizobium sp. OAE497 ABIE40_RS08030 sensor domain-containing diguanylate cyclase insig. 40 44
  Kangiella aquimarina DSM 16071 B158DRAFT_1583 diguanylate cyclase insig. 40 41
  Escherichia coli ECRC100 OKFHMN_04535 dgcT putative diguanylate cyclase DgcT insig. 41 45
  Escherichia coli ECRC102 NIAGMN_23800 dgcT putative diguanylate cyclase DgcT no data 41 45
  Escherichia coli ECRC98 JDDGAC_08145 dgcT putative diguanylate cyclase DgcT insig. 41 45
  Escherichia coli ECRC99 KEDOAH_23210 dgcT putative diguanylate cyclase DgcT no data 41 45
  Pseudomonas orientalis W4I3 QF045_RS07670 sensor domain-containing diguanylate cyclase insig. 42 44
  Escherichia fergusonii Becca EFB2_03056 putative diguanylate cyclase DgcT insig. 38 46
  Sphingobium sp. HT1-2 GFF501 hypothetical protein insig. 33 67
  Escherichia coli ECOR38 HEPCGN_23600 GGDEF domain-containing protein insig. 38 46
  Acidovorax sp. GW101-3H11 Ac3H11_2439 FOG: GGDEF domain insig. 37 50
  Escherichia coli BL21 ECD_01027 diguanylate cyclase, membrane-anchored no data 39 45
  Escherichia coli ECOR27 NOLOHH_21440 dgcT putative diguanylate cyclase DgcT no data 39 45
  Escherichia coli ECRC62 BNILDI_19600 dgcT putative diguanylate cyclase DgcT insig. 39 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02639 putative diguanylate cyclase DgcT insig. 39 45
  Escherichia coli BW25113 b1025 ycdT predicted diguanylate cyclase (NCBI) strong 39 45
  Agrobacterium fabrum C58 Atu1060 two component response regulator insig. 38 43
  Rhodospirillum rubrum S1H Rru_A3132 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) insig. 37 53
  Pseudomonas putida KT2440 PP_3348 GGDEF domain protein sig. 36 53
  Pseudomonas syringae pv. syringae B728a Psyr_4206 GGDEF domain protein insig. 31 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4206 GGDEF domain protein insig. 31 64
  Rahnella sp. WP5 EX31_RS16515 GGDEF domain-containing protein insig. 38 42
  Pseudomonas stutzeri RCH2 Psest_3192 diguanylate cyclase (GGDEF) domain strong 42 41
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02645 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 43
  Enterobacter sp. TBS_079 MPMX20_02482 putative diguanylate cyclase DgcT cofit 38 45
  Shewanella oneidensis MR-1 SO1551 GGDEF domain protein (NCBI ptt file) strong 37 44
  Paraburkholderia sabiae LMG 24235 QEN71_RS13615 bifunctional diguanylate cyclase/phosphodiesterase insig. 26 97
  Marinobacter adhaerens HP15 HP15_3912 diguanylate cyclase insig. 42 41
  Pseudomonas fluorescens FW300-N2E3 AO353_03790 hypothetical protein sig. 30 80
  Agrobacterium fabrum C58 Atu3061 diguanylate cyclase insig. 38 45
  Shewanella loihica PV-4 Shew_2754 diguanylate cyclase (RefSeq) strong 34 45
  Pseudomonas fluorescens FW300-N2E3 AO353_15375 deoxyribonuclease strong 41 44
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 36 48
  Shewanella sp. ANA-3 Shewana3_2884 diguanylate cyclase (RefSeq) sig. 37 44
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2029 diguanylate cyclase (GGDEF) domain insig. 45 41
  Bosea sp. OAE506 ABIE41_RS02130 GGDEF domain-containing protein insig. 42 41
  Rhizobium sp. OAE497 ABIE40_RS11215 diguanylate cyclase insig. 40 42
  Xanthobacter sp. DMC5 GFF628 hypothetical protein insig. 39 44
  Enterobacter asburiae PDN3 EX28DRAFT_3573 diguanylate cyclase (GGDEF) domain insig. 32 52
  Sphingobium sp. HT1-2 GFF3906 hypothetical protein cofit 39 45
  Pseudomonas sp. SVBP6 COO64_RS12180 GGDEF domain-containing protein insig. 39 42
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 38 45
  Klebsiella michiganensis M5al BWI76_RS10635 GGDEF domain-containing protein insig. 38 42
  Vibrio cholerae E7946 ATCC 55056 CSW01_11340 GGDEF domain-containing protein insig. 38 43
  Vibrio cholerae E7946 ATCC 55056 CSW01_17005 sensor domain-containing diguanylate cyclase insig. 35 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS30605 GGDEF domain-containing protein insig. 37 42
  Pseudomonas aeruginosa MRSN321 DY961_RS21395 sensor domain-containing diguanylate cyclase insig. 40 41
  Pseudomonas aeruginosa PUPa3 DQ20_RS37895 sensor domain-containing diguanylate cyclase insig. 40 41
  Rhodospirillum rubrum S1H Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) cofit 40 41
  Pseudomonas segetis P6 ACVTMO_RS18465 GGDEF domain-containing protein insig. 40 41
  Pectobacterium carotovorum WPP14 HER17_RS06250 GGDEF domain-containing protein insig. 33 53
  Burkholderia phytofirmans PsJN BPHYT_RS28145 diguanylate cyclase insig. 38 42
  Azospirillum sp. SherDot2 MPMX19_00002 Response regulator PleD insig. 37 51
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 43
  Paraburkholderia graminis OAS925 ABIE53_005222 diguanylate cyclase (GGDEF)-like protein sig. 40 45
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 40 48
  Xanthobacter sp. DMC5 GFF3523 hypothetical protein insig. 38 46
  Azospirillum brasilense Sp245 AZOBR_RS16180 diguanylate cyclase strong 37 50
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 42 41
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 39 45
  Pseudomonas sp. DMC3 GFF5034 hypothetical protein cofit 32 66
  Klebsiella michiganensis M5al BWI76_RS21800 MASE2 domain/diguanylate cyclase sig. 31 58
  Pseudomonas syringae pv. syringae B728a Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 41 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2110 diguanylate cyclase with PAS/PAC sensor insig. 41 40
  Shewanella amazonensis SB2B Sama_2418 GGDEF domain-containing protein (RefSeq) strong 36 41
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3367.1 GGDEF family protein insig. 42 43
  Agrobacterium fabrum C58 Atu5372 hypothetical protein no data 41 41
  Pseudomonas aeruginosa MRSN321 DY961_RS08255 diguanylate cyclase insig. 44 40
  Pseudomonas aeruginosa PUPa3 DQ20_RS44565 diguanylate cyclase insig. 44 40
  Pectobacterium carotovorum WPP14 HER17_RS13535 sensor domain-containing diguanylate cyclase insig. 41 42
  Desulfovibrio vulgaris Hildenborough JW710 DVU1862 GGDEF domain protein (TIGR) strong 40 42
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 35 43
  Pseudomonas fluorescens SBW25 PFLU_RS04750 GGDEF domain-containing protein insig. 42 44
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04750 GGDEF domain-containing protein insig. 42 44
  Acidovorax sp. GW101-3H11 Ac3H11_1120 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) insig. 38 48
  Pseudomonas segetis P6 ACVTMO_RS02620 GGDEF domain-containing protein cofit 38 41
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 37 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 37 50
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 36 52
  Acidovorax sp. GW101-3H11 Ac3H11_4285 diguanylate cyclase insig. 33 51
  Rahnella sp. WP5 EX31_RS20690 diguanylate cyclase cofit 31 62
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 40 46
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 39 42
  Pseudomonas stutzeri RCH2 Psest_3216 diguanylate cyclase (GGDEF) domain strong 38 44