Homologs of PFR28_04179 from Pseudomonas sp. RS175

Sensor histidine kinase RcsC
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. RS175 PFR28_04179 Sensor histidine kinase RcsC sig. 100 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4666 Sensory box/GGDEF family protein insig. 96 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13725 diguanylate cyclase insig. 96 100
o Pseudomonas fluorescens FW300-N2E3 AO353_07885 diguanylate cyclase strong 87 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2405 Sensory box/GGDEF family protein insig. 87 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1071 Sensory box/GGDEF family protein insig. 86 100
o Pseudomonas fluorescens SBW25 PFLU_RS28055 EAL domain-containing protein insig. 74 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28055 EAL domain-containing protein sig. 74 99
o Pseudomonas simiae WCS417 PS417_26405 diguanylate cyclase insig. 73 100
o Pseudomonas syringae pv. syringae B728a Psyr_0509 PAS:GGDEF insig. 67 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0509 PAS:GGDEF insig. 67 99
o Pseudomonas putida KT2440 PP_4959 diguanylate cyclase cofit 69 99
o Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 60 99
o Pseudomonas stutzeri RCH2 Psest_3216 diguanylate cyclase (GGDEF) domain strong 57 99
  Dechlorosoma suillum PS Dsui_3334 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 97
  Pseudomonas syringae pv. syringae B728a Psyr_1098 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1098 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 98
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 97
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 84
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 79
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 37 81
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 35 85
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 35 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 38 80
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 38 80
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 38 80
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 38 81
  Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 36 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 35 82
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 33 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 35 83
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 35 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 36 82
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 38 80
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 35 82
  Dechlorosoma suillum PS Dsui_2419 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00437 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 36 82
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 36 84
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 35 82
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 34 82
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 37 82
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 36 82
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 36 82
  Paraburkholderia graminis OAS925 ABIE53_002821 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein sig. 35 82
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 33 82
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 82
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 39 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 39 63
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 37 82
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 34 80
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 37 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 37 82
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 36 82
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 37 82
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 35 82
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 82
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 80
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 36 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 36 82
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 34 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1818 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 80
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 34 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 36 82
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 35 85
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 36 80
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 35 81
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 36 82
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 40 63
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 82
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 36 82
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 87
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 33 81
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 35 85
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 81
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 80
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 35 81
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 34 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 64
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 81
  Dickeya dadantii 3937 DDA3937_RS11465 EAL domain-containing protein strong 34 83
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 39 67
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 37 66
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 35 79
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 34 80
  Azospirillum brasilense Sp245 AZOBR_RS30720 diguanylate cyclase insig. 35 81
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 40 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 66
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 35 79
  Dickeya dianthicola 67-19 HGI48_RS11510 EAL domain-containing protein cofit 34 83
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 36 82
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 34 78
  Dickeya dianthicola ME23 DZA65_RS11845 EAL domain-containing protein cofit 34 83
  Magnetospirillum magneticum AMB-1 AMB_RS22740 GGDEF domain-containing protein insig. 37 80
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 34 81
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 32 82