Homologs of LRK55_RS12715 from Rhodanobacter denitrificans MT42

EAL domain-containing protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS12715 EAL domain-containing protein cofit 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13015 EAL domain-containing protein insig. 98 100
  Rhodanobacter sp. FW510-T8 OKGIIK_02390 Diguanylate cyclase insig. 78 87
o Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 37 84
o Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 37 86
o Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 37 84
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 38 87
o Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 38 87
o Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 38 86
o Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 34 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 35 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 85
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 85
o Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 38 84
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00437 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 84
o Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 37 84
o Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 35 85
o Paraburkholderia graminis OAS925 ABIE53_002821 diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein sig. 37 84
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 86
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 37 85
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 64
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 41 68
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 66
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 40 65
  Synechococcus elongatus PCC 7942 Synpcc7942_1716 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) strong 32 97
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 63
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 53
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 66
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 66
o Shewanella sp. ANA-3 Shewana3_2308 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 32 83
o Shewanella oneidensis MR-1 SO2216 sensory box protein (NCBI ptt file) insig. 32 83
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 37 66
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 37 68
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 37 66
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 37 66
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 39 65
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 39 61
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 38 61
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 37 63
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 38 64
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22225 sensor domain-containing diguanylate cyclase cofit 40 61
  Ralstonia solanacearum UW163 UW163_RS22770 sensor domain-containing diguanylate cyclase insig. 40 61
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 38 70
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 37 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 37 63
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 38 65
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 63
  Ralstonia solanacearum PSI07 RPSI07_RS00975 sensor domain-containing diguanylate cyclase cofit 39 61
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 66
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 37 66
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 36 64
  Rhizobium sp. OAE497 ABIE40_RS24095 EAL domain-containing protein insig. 42 55
  Ralstonia solanacearum GMI1000 RS_RS18380 sensor domain-containing diguanylate cyclase strong 40 61
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 38 64
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 37 63
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 37 66
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 36 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 36 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 65
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 37 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 36 66
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 37 63
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 64
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 37 65
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 36 66
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 36 74
  Dechlorosoma suillum PS Dsui_2419 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 36 64
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 38 61
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 38 61
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 37 63
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 37 65
  Acidovorax sp. GW101-3H11 Ac3H11_4670 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 36 66
  Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 36 65
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 39 64
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 38 64
  Ralstonia sp. UNC404CL21Col ABZR87_RS17290 EAL domain-containing protein strong 39 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 36 64
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 71
  Shewanella oneidensis MR-1 SO3389 sensory box protein (NCBI ptt file) insig. 38 64
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 41 53
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 36 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 36 65
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 67
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 65
  Acidovorax sp. GW101-3H11 Ac3H11_3255 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 65
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 38 64
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 37 65
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 37 66
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 36 65
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 36 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4868 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 52
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 38 64
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 36 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 42 52