Homologs of HSERO_RS14035 from Herbaspirillum seropedicae SmR1

C4-dicarboxylate ABC transporter
SEED: TRAP transporter solute receptor, unknown substrate 6

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS14035 C4-dicarboxylate ABC transporter insig. 100 100
  Herbaspirillum seropedicae SmR1 HSERO_RS04240 C4-dicarboxylate ABC transporter sig. 79 91
  Azospirillum brasilense Sp245 AZOBR_RS09605 C4-dicarboxylate ABC transporter sig. 72 95
  Azospirillum sp. SherDot2 MPMX19_00659 C4-dicarboxylate-binding periplasmic protein DctP insig. 72 97
  Magnetospirillum magneticum AMB-1 AMB_RS04560 C4-dicarboxylate ABC transporter cofit 69 97
  Rhodospirillum rubrum S1H Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) strong 70 95
  Castellaniella sp019104865 MT123 ABCV34_RS13980 TRAP transporter substrate-binding protein insig. 70 91
  Rhodopseudomonas palustris CGA009 TX73_010550 TRAP transporter substrate-binding protein strong 63 96
  Dechlorosoma suillum PS Dsui_3155 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 67 89
o Pseudomonas stutzeri RCH2 Psest_2664 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 54 87
  Castellaniella sp019104865 MT123 ABCV34_RS05050 TRAP transporter substrate-binding protein insig. 49 96
  Pseudomonas stutzeri RCH2 Psest_4268 tripartite ATP-independent periplasmic transporter solute receptor, DctP family strong 51 87
  Pseudomonas sp. RS175 PFR28_00119 C4-dicarboxylate-binding periplasmic protein DctP insig. 51 87
o Pseudomonas fluorescens SBW25 PFLU_RS16930 TRAP transporter substrate-binding protein insig. 47 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16930 TRAP transporter substrate-binding protein strong 47 94
  Pseudomonas sp. RS175 PFR28_00257 C4-dicarboxylate-binding periplasmic protein DctP insig. 50 87
o Pseudomonas simiae WCS417 PS417_14910 C4-dicarboxylate ABC transporter insig. 47 94
  Pseudomonas fluorescens FW300-N2C3 AO356_06880 C4-dicarboxylate ABC transporter insig. 46 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3238 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 47 87
  Pseudomonas stutzeri RCH2 Psest_2142 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 44 94
  Pseudomonas stutzeri RCH2 Psest_0787 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 46 87
o Pseudomonas sp. S08-1 OH686_16140 TRAP-type transporter, substrate-binding protein cofit 42 94
  Pseudomonas stutzeri RCH2 Psest_0786 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 44 89
  Shewanella oneidensis MR-1 SO3134 dctP C4-dicarboxylate-binding periplasmic protein (NCBI ptt file) insig. 44 87
  Shewanella sp. ANA-3 Shewana3_1416 TRAP dicarboxylate transporter, DctP subunit (RefSeq) strong 43 87
  Shewanella loihica PV-4 Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) strong 40 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_09650 C4-dicarboxylate ABC transporter insig. 41 87
  Shewanella amazonensis SB2B Sama_2209 alpha-ketoglutarate TRAP transporter, solute receptor component (from data) strong 41 87
  Phaeobacter inhibens DSM 17395 PGA1_c20680 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) strong 39 91
  Azospirillum sp. SherDot2 MPMX19_03529 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 35 88
  Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 33 93
  Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 36 90
  Acidovorax sp. GW101-3H11 Ac3H11_3226 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 33 97
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 32 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5505 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 33 90
  Azospirillum brasilense Sp245 AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) strong 32 96
o Variovorax sp. SCN45 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 88
  Pseudomonas stutzeri RCH2 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) strong 32 99
  Pseudomonas sp. RS175 PFR28_01614 hypothetical protein insig. 31 96
  Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 32 94
  Castellaniella sp019104865 MT123 ABCV34_RS12265 TRAP transporter substrate-binding protein insig. 32 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 97
  Azospirillum brasilense Sp245 AZOBR_RS26640 ABC transporter substrate-binding protein insig. 31 87
  Azospirillum sp. SherDot2 MPMX19_04764 Solute-binding protein insig. 33 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1301 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 87
  Pseudomonas fluorescens FW300-N2C3 AO356_25645 ABC transporter substrate-binding protein insig. 30 96
  Castellaniella sp019104865 MT123 ABCV34_RS07845 TRAP transporter substrate-binding protein insig. 31 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2987 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 32 96
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 30 87
  Castellaniella sp019104865 MT123 ABCV34_RS13675 TRAP transporter substrate-binding protein insig. 29 91
  Acidovorax sp. GW101-3H11 Ac3H11_3524 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 80
  Acidovorax sp. GW101-3H11 Ac3H11_2073 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 33 76
  Azospirillum brasilense Sp245 AZOBR_RS25405 C4-dicarboxylate ABC transporter insig. 32 85
  Dinoroseobacter shibae DFL-12 Dshi_3326 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 31 89
  Rhodospirillum rubrum S1H Rru_A2239 TRAP dicarboxylate transporter- DctP subunit (NCBI) insig. 33 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5015 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 30 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2135 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 32 83
  Desulfovibrio vulgaris Hildenborough JW710 DVU0011 TRAP dicarboxylate family transporter (TIGR) insig. 30 82
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1656 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 87
  Variovorax sp. OAS795 ABID97_RS26055 TRAP transporter substrate-binding protein no data 30 83
  Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 34 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1783 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 31 86
  Azospirillum sp. SherDot2 MPMX19_02035 C4-dicarboxylate-binding periplasmic protein DctP insig. 31 86
  Bosea sp. OAE506 ABIE41_RS24145 TRAP transporter substrate-binding protein insig. 29 87
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 33 86
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 34 89
  Variovorax sp. OAS795 ABID97_RS05960 DctP family TRAP transporter solute-binding subunit insig. 30 94
  Variovorax sp. SCN45 GFF4584 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 30 89
  Acidovorax sp. GW101-3H11 Ac3H11_1949 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 31 85
  Alteromonas macleodii MIT1002 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO insig. 29 87
  Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 26 96
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO cofit 26 96
  Sinorhizobium meliloti 1021 SMc00265 periplasmic binding protein insig. 30 80
  Cupriavidus basilensis FW507-4G11 RR42_RS06535 C4-dicarboxylate ABC transporter insig. 31 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2427 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 29 88
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO cofit 26 96
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO cofit 26 96
  Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 26 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 26 96
  Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 26 96
o Pseudomonas syringae pv. syringae B728a Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 26 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0900 TRAP dicarboxylate transporter- DctP subunit insig. 26 89
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 26 96
  Sinorhizobium meliloti 1021 SM_b21438 C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide insig. 31 86
  Dechlorosoma suillum PS Dsui_2532 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 30 88
  Azospirillum brasilense Sp245 AZOBR_RS02715 C4-dicarboxylate ABC transporter insig. 31 88
  Sinorhizobium meliloti 1021 SMa0252 TRAP-type periplasmic solute-binding protein insig. 28 97
  Azospirillum sp. SherDot2 MPMX19_05801 Solute-binding protein insig. 29 80
  Agrobacterium fabrum C58 Atu2744 C4-dicarboxylate binding protein insig. 27 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU0707 dctP TRAP dicarboxylate family transporter (TIGR) insig. 30 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 27 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU2822 TRAP dicarboxylate family transporter (TIGR) insig. 29 87
  Dinoroseobacter shibae DFL-12 Dshi_0958 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 29 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 27 90
  Bosea sp. OAE506 ABIE41_RS01360 sialic acid TRAP transporter substrate-binding protein SiaP insig. 30 82
  Azospirillum brasilense Sp245 AZOBR_RS31400 C4-dicarboxylate ABC transporter insig. 28 81
  Sinorhizobium meliloti 1021 SMc00271 periplasmic binding protein insig. 32 65
  Castellaniella sp019104865 MT123 ABCV34_RS12220 DctP family TRAP transporter solute-binding subunit insig. 29 85
  Azospirillum brasilense Sp245 AZOBR_RS30130 C4-dicarboxylate ABC transporter insig. 26 81
  Desulfovibrio vulgaris Miyazaki F DvMF_1932 TRAP dicarboxylate transporter, DctP subunit (RefSeq) insig. 29 94