Homologs of HSERO_RS05680 from Herbaspirillum seropedicae SmR1

DNA-directed RNA polymerase subunit alpha
SEED: Dipeptide transport system permease protein dppC
KEGG: peptide/nickel transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS05680 DNA-directed RNA polymerase subunit alpha insig. 100 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_362 Dipeptide transport system permease protein dppC insig. 59 94
o Pseudomonas syringae pv. syringae B728a Psyr_0155 Binding-protein-dependent transport systems inner membrane component insig. 57 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0155 Binding-protein-dependent transport systems inner membrane component insig. 57 95
o Variovorax sp. OAS795 ABID97_RS25895 ABC transporter permease insig. 59 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS31905 ABC transporter permease insig. 62 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18930 ABC transporter permease insig. 61 92
o Ralstonia solanacearum UW163 UW163_RS20200 ABC transporter permease insig. 61 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4925 Dipeptide transport system permease protein dppC no data 59 92
o Pseudomonas fluorescens FW300-N2C3 AO356_26755 DNA-directed RNA polymerase subunit alpha insig. 59 89
o Burkholderia phytofirmans PsJN BPHYT_RS30185 DNA-directed RNA polymerase subunit alpha insig. 62 95
o Ralstonia solanacearum PSI07 RPSI07_RS04620 ABC transporter permease insig. 61 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS21515 ABC transporter permease insig. 61 88
o Pseudomonas fluorescens FW300-N2E3 AO353_28260 DNA-directed RNA polymerase subunit alpha insig. 59 87
o Pseudomonas fluorescens SBW25 PFLU_RS19770 ABC transporter permease insig. 57 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19770 ABC transporter permease insig. 57 95
o Paraburkholderia graminis OAS925 ABIE53_005034 peptide/nickel transport system permease protein sig. 63 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06334 peptide/nickel transport system permease protein insig. 62 93
o Sinorhizobium meliloti 1021 SMa1863 ABC transporter permease insig. 59 89
o Agrobacterium fabrum C58 Atu3411 ABC transporter permease insig. 58 85
o Azospirillum sp. SherDot2 MPMX19_06840 Glutathione transport system permease protein GsiD insig. 53 97
o Pantoea sp. MT58 IAI47_07610 ABC transporter permease insig. 55 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3202 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) insig. 42 92
o Rahnella sp. WP5 EX31_RS11590 ABC transporter permease insig. 45 88
o Azospirillum brasilense Sp245 AZOBR_RS04890 putative ABC Transporter permease protein insig. 44 82
o Phaeobacter inhibens DSM 17395 PGA1_c22130 putative glutathione transport system permease protein GsiD insig. 45 86
  Sinorhizobium meliloti 1021 SMc01644 ABC transporter permease insig. 43 88
o Rhizobium sp. OAE497 ABIE40_RS25470 ABC transporter permease insig. 41 91
  Agrobacterium fabrum C58 Atu5346 ABC transporter membrane spanning protein (oligopeptide) no data 41 89
  Variovorax sp. OAS795 ABID97_RS11670 ABC transporter permease insig. 37 98
  Dickeya dadantii 3937 DDA3937_RS16395 ABC transporter permease insig. 40 88
  Dickeya dianthicola 67-19 HGI48_RS16495 ABC transporter permease insig. 43 81
  Dickeya dianthicola ME23 DZA65_RS17580 ABC transporter permease insig. 43 81
  Paraburkholderia graminis OAS925 ABIE53_003327 peptide/nickel transport system permease protein sig. 38 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS02935 ABC transporter permease insig. 37 93
  Bosea sp. OAE506 ABIE41_RS18430 ABC transporter permease insig. 38 94
  Sinorhizobium meliloti 1021 SMa0299 ABC transporter permease insig. 36 90
  Rahnella sp. WP5 EX31_RS00700 ABC transporter permease insig. 40 86
  Dickeya dianthicola ME23 DZA65_RS01900 ABC transporter permease sig. 40 83
  Dickeya dadantii 3937 DDA3937_RS01895 ABC transporter permease insig. 39 83
  Dickeya dianthicola 67-19 HGI48_RS01845 ABC transporter permease insig. 39 83
  Azospirillum sp. SherDot2 MPMX19_03542 Glutathione transport system permease protein GsiD insig. 37 81
  Burkholderia phytofirmans PsJN BPHYT_RS15775 peptide ABC transporter permease insig. 36 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04093 peptide/nickel transport system permease protein insig. 36 92
  Rhizobium sp. OAE497 ABIE40_RS29600 ABC transporter permease insig. 35 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00255 glutathione ABC transporter permease GsiD insig. 32 97
  Ralstonia solanacearum UW163 UW163_RS13585 glutathione ABC transporter permease GsiD insig. 32 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2462 oligopeptide ABC transporter, permease protein (TIGR) cofit 36 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS11720 glutathione ABC transporter permease GsiD insig. 32 97
  Azospirillum sp. SherDot2 MPMX19_03402 putative D,D-dipeptide transport system permease protein DdpC insig. 31 93
  Castellaniella sp019104865 MT123 ABCV34_RS13525 glutathione ABC transporter permease GsiD insig. 33 92
  Pantoea sp. MT58 IAI47_13115 glutathione ABC transporter permease GsiD insig. 33 90
  Bosea sp. OAE506 ABIE41_RS12200 ABC transporter permease insig. 33 93
  Pseudomonas putida KT2440 PP_4454 putative Opine ABC transporter, permease protein insig. 33 95
  Rahnella sp. WP5 EX31_RS09190 ABC transporter permease insig. 34 90
  Cupriavidus basilensis FW507-4G11 RR42_RS07940 ABC transporter permease insig. 33 92
  Sinorhizobium meliloti 1021 SMa0106 ABC transporter permease insig. 34 87
  Ralstonia solanacearum PSI07 RPSI07_RS17225 glutathione ABC transporter permease GsiD insig. 33 84
  Paraburkholderia graminis OAS925 ABIE53_006346 peptide/nickel transport system permease protein sig. 34 92
  Ralstonia solanacearum GMI1000 RS_RS06930 glutathione ABC transporter permease GsiD cofit 31 97
  Rahnella sp. WP5 EX31_RS07500 ABC transporter permease insig. 34 77
  Dickeya dadantii 3937 DDA3937_RS02235 ABC transporter permease insig. 32 95
  Dickeya dianthicola ME23 DZA65_RS02325 ABC transporter permease insig. 33 91
  Burkholderia phytofirmans PsJN BPHYT_RS15525 glutathione ABC transporter permease GsiD insig. 32 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04046 glutathione transport system permease protein insig. 31 98
  Dickeya dianthicola 67-19 HGI48_RS02190 ABC transporter permease insig. 32 95
  Paraburkholderia graminis OAS925 ABIE53_003269 glutathione transport system permease protein insig. 32 83
  Variovorax sp. OAS795 ABID97_RS15395 glutathione ABC transporter permease GsiD insig. 32 85
  Agrobacterium fabrum C58 Atu1199 ABC transporter, membrane spanning protein insig. 34 91
  Rahnella sp. WP5 EX31_RS17550 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein insig. 37 72
  Agrobacterium fabrum C58 Atu4115 dipeptide ABC transporter permease sig. 34 89
  Pectobacterium carotovorum WPP14 HER17_RS13495 glutathione ABC transporter permease GsiD insig. 33 83
  Rahnella sp. WP5 EX31_RS10230 D,D-dipeptide ABC transporter permease insig. 30 88
  Phaeobacter inhibens DSM 17395 PGA1_262p01720 putative glutathione transport system permease protein insig. 34 86
  Variovorax sp. SCN45 GFF1212 Oligopeptide transport permease protein OppC-like @ Glutathione ABC transporter, permease protein GsiD insig. 32 85
  Agrobacterium fabrum C58 Atu2516 ABC transporter, membrane spanning protein (dipeptide) insig. 32 89
  Enterobacter sp. TBS_079 MPMX20_02358 putative D,D-dipeptide transport system permease protein DdpC insig. 32 89
  Dinoroseobacter shibae DFL-12 Dshi_3794 binding-protein-dependent transport systems inner membrane component (RefSeq) insig. 31 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01028 peptide/nickel transport system permease protein insig. 33 92
  Agrobacterium fabrum C58 Atu4721 dipeptide ABC transporter permease insig. 33 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS31495 ABC transporter permease insig. 32 95
  Erwinia tracheiphila SCR3 LU632_RS09570 gsiD glutathione ABC transporter permease GsiD insig. 32 91
  Sinorhizobium meliloti 1021 SMc02028 peptide ABC transporter permease insig. 32 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS16850 glutathione ABC transporter permease GsiD insig. 31 85
  Herbaspirillum seropedicae SmR1 HSERO_RS15945 peptide ABC transporter permease insig. 31 94
  Enterobacter asburiae PDN3 EX28DRAFT_2671 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components insig. 33 86
  Enterobacter sp. TBS_079 MPMX20_01472 Glutathione transport system permease protein GsiD strong 30 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02880 Glutathione transport system permease protein GsiD insig. 32 90
  Cupriavidus basilensis FW507-4G11 RR42_RS11980 glutathione ABC transporter permease insig. 31 83
  Enterobacter sp. TBS_079 MPMX20_00907 Glutathione transport system permease protein GsiD insig. 32 86
  Azospirillum sp. SherDot2 MPMX19_04007 Glutathione transport system permease protein GsiD insig. 33 81
  Klebsiella michiganensis M5al BWI76_RS09110 glutathione ABC transporter permease GsiD strong 31 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS28695 ABC transporter permease subunit cofit 35 85
  Escherichia fergusonii Becca EFB2_03274 Glutathione transport system permease protein GsiD insig. 31 90
  Escherichia coli ECOR27 NOLOHH_22445 gsiD glutathione ABC transporter permease GsiD no data 31 90
  Escherichia coli ECOR38 HEPCGN_01945 gsiD glutathione ABC transporter permease GsiD cofit 31 90
  Escherichia coli ECRC101 OKFHMN_06085 gsiD glutathione ABC transporter permease GsiD insig. 31 90
  Escherichia coli ECRC101 MCAODC_25300 gsiD glutathione ABC transporter permease GsiD insig. 31 90
  Escherichia coli ECRC102 NIAGMN_04130 gsiD glutathione ABC transporter permease GsiD no data 31 90
  Escherichia coli ECRC62 BNILDI_20720 gsiD glutathione ABC transporter permease GsiD insig. 31 90