Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04125 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS00120 | | LysR family transcriptional regulator | insig. | 38 | 95 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS33885 | | LysR family transcriptional regulator | insig. | 37 | 94 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS26960 | | LysR family transcriptional regulator | insig. | 37 | 97 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS17965 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS30070 | | LysR family transcriptional regulator | insig. | 36 | 96 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS22730 | | LysR family transcriptional regulator | insig. | 36 | 96 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03339 | | transcriptional regulator, LysR family | no data | 36 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS27195 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| Pectobacterium carotovorum WPP14 | HER17_RS18045 | | LysR family transcriptional regulator | cofit | 32 | 98 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03905 | | hypothetical protein | insig. | 35 | 96 |
| Serratia liquefaciens MT49 | IAI46_07130 | | LysR family transcriptional regulator | insig. | 36 | 85 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.386.1 | | LysR family transcriptional regulator STM3121 | insig. | 37 | 86 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS00240 | | LysR family transcription regulator protein | insig. | 34 | 96 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17295 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| Burkholderia phytofirmans PsJN | BPHYT_RS32760 | | LysR family transcriptional regulator | insig. | 37 | 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4886 | | LysR family transcriptional regulator STM3121 | insig. | 37 | 94 |
| Variovorax sp. SCN45 | GFF2971 | | Transcriptional regulator, LysR family | insig. | 37 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32390 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10680 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS21255 | | LysR family transcriptional regulator | strong | 33 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS38685 | | LysR family transcriptional regulator | insig. | 32 | 90 |
| Rahnella sp. WP5 | EX31_RS04240 | | LysR family transcriptional regulator | insig. | 33 | 81 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13490 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01885 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3076 | | LysR family transcriptional regulator STM3121 | insig. | 32 | 94 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04511 | | DNA-binding transcriptional regulator, LysR family | insig. | 34 | 94 |
| Rhizobium sp. OAE497 | ABIE40_RS01530 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05585 | | LysR substrate-binding domain-containing protein | sig. | 31 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_004883 | | DNA-binding transcriptional LysR family regulator | sig. | 32 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23410 | | hypothetical protein | insig. | 32 | 95 |
| Pantoea sp. MT58 | IAI47_21735 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| Rahnella sp. WP5 | EX31_RS16990 | | LysR family transcriptional regulator | insig. | 35 | 84 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2404 | | Transcriptional regulator | insig. | 33 | 94 |
| Azospirillum brasilense Sp245 | AZOBR_RS19665 | | LysR family transcripitonal regulator | insig. | 33 | 96 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3313 | | transcriptional regulator, LysR family (TIGR) | insig. | 36 | 84 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1786 | | LysR family transcriptional regulator YnfL | insig. | 34 | 81 |
| Enterobacter sp. TBS_079 | MPMX20_01221 | | HTH-type transcriptional regulator BenM | insig. | 33 | 95 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 32 | 98 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1494 | | Transcriptional regulator | insig. | 34 | 81 |
| Dickeya dianthicola 67-19 | HGI48_RS03375 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS22265 | | transcriptional regulator | strong | 28 | 95 |
| Ralstonia solanacearum GMI1000 | RS_RS23540 | | LysR family transcriptional regulator | no data | 34 | 92 |
| Ralstonia solanacearum GMI1000 | RS_RS23670 | | LysR family transcriptional regulator | no data | 34 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03715 | | transcriptional regulator, LysR family | no data | 34 | 94 |
| Enterobacter sp. TBS_079 | MPMX20_02062 | | Hca operon transcriptional activator HcaR | sig. | 34 | 81 |
| Dickeya dianthicola ME23 | DZA65_RS03420 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Dickeya dadantii 3937 | DDA3937_RS03225 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1900 | | LysR family transcriptional regulator STM3121 | no data | 35 | 85 |
| Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 32 | 93 |
| Escherichia fergusonii Becca | EFB2_02397 | | Hca operon transcriptional activator HcaR | insig. | 32 | 81 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08910 | | LysR family transcriptional regulator | no data | 32 | 81 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS28030 | | hypothetical protein | insig. | 35 | 82 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1988 | | transcriptional regulator, LysR family | insig. | 33 | 95 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0203 | | Transcriptional regulator | insig. | 28 | 97 |
| Rhodanobacter denitrificans MT42 | LRK55_RS17870 | | LysR family transcriptional regulator | strong | 32 | 95 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS18015 | | LysR family transcriptional regulator | strong | 32 | 95 |
| Pseudomonas putida KT2440 | PP_3179 | | Transcriptional regulator, LysR family | sig. | 31 | 96 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS36440 | | LysR family transcriptional regulator | insig. | 34 | 82 |
| Pseudomonas putida KT2440 | PP_1028 | | Transcriptional regulator, LysR family | sig. | 33 | 92 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07095 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2033 | | Xanthosine operon regulatory protein XapR, LysR family | insig. | 32 | 95 |
| Pantoea sp. MT58 | IAI47_09745 | | LysR family transcriptional regulator | insig. | 34 | 81 |
| Escherichia coli BL21 | ECD_01564 | | LysR family putative transcriptional regulator | no data | 32 | 81 |
| Escherichia coli ECOR27 | NOLOHH_18240 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli ECOR38 | HEPCGN_06110 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 32 | 81 |
| Escherichia coli ECRC101 | OKFHMN_27735 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli ECRC101 | MCAODC_17675 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli ECRC102 | NIAGMN_00340 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli ECRC62 | BNILDI_17030 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 32 | 81 |
| Escherichia coli ECRC98 | JDDGAC_02325 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli ECRC99 | KEDOAH_00370 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 32 | 81 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02131 | | Hca operon transcriptional activator HcaR | insig. | 32 | 81 |
| Escherichia coli BW25113 | b1595 | ynfL | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 32 | 81 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10210 | | LysR family transcriptional regulator | no data | 30 | 99 |
| Variovorax sp. SCN45 | GFF5995 | | LysR family transcriptional regulator STM3121 | insig. | 35 | 97 |
| Klebsiella michiganensis M5al | BWI76_RS16740 | | transcriptional regulator | insig. | 32 | 95 |
| Pseudomonas simiae WCS417 | PS417_06970 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS00130 | | LysR substrate-binding domain-containing protein | insig. | 33 | 99 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1150 | | Transcriptional regulator | cofit | 32 | 88 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00760 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| Ralstonia solanacearum UW163 | UW163_RS14095 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| Pseudomonas stutzeri RCH2 | Psest_3707 | | Transcriptional regulator | insig. | 33 | 81 |
| Enterobacter sp. TBS_079 | MPMX20_02334 | | HTH-type transcriptional regulator GltC | insig. | 32 | 86 |
| Escherichia coli ECOR27 | NOLOHH_13930 | xapR | DNA-binding transcriptional regulator XapR | cofit | 30 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15725 | | LysR family transcriptional regulator | insig. | 33 | 93 |
| Rhodopseudomonas palustris CGA009 | TX73_002855 | | LysR family transcriptional regulator | insig. | 33 | 94 |
| Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 31 | 84 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04530 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| Ralstonia solanacearum UW163 | UW163_RS09140 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1784 | | Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) | insig. | 31 | 94 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19020 | | LysR family transcriptional regulator | insig. | 30 | 94 |
| Escherichia coli BW25113 | b2405 | xapR | DNA-binding transcriptional activator (NCBI) | insig. | 30 | 95 |
| Ralstonia solanacearum GMI1000 | RS_RS12100 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22550 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2139 | | transcriptional regulator, LysR family | insig. | 30 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23510 | | LysR family transcriptional regulator | insig. | 36 | 81 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01073 | | DNA-binding transcriptional regulator, LysR family | insig. | 36 | 81 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4928 | | LysR family transcriptional regulator STM3121 | insig. | 34 | 93 |
| Serratia liquefaciens MT49 | IAI46_07575 | | LysR family transcriptional regulator | insig. | 35 | 84 |