Homologs of PS417_24385 from Pseudomonas simiae WCS417

tRNA (uracil-5-)-methyltransferase
SEED: tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
KEGG: tRNA (uracil-5-)-methyltransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_24385 tRNA (uracil-5-)-methyltransferase sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 97 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) strong 94 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) insig. 94 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) sig. 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_13905 tRNA (uracil-5-)-methyltransferase sig. 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15600 tRNA (uracil-5-)-methyltransferase insig. 92 100
o Pseudomonas sp. RS175 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 92 100
o Pseudomonas putida KT2440 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase strong 80 100
o Pseudomonas sp. S08-1 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase cofit 79 99
o Pseudomonas syringae pv. syringae B728a Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 82 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 82 99
o Pseudomonas stutzeri RCH2 Psest_3451 tRNA (uracil-5-)-methyltransferase sig. 78 99
o Acinetobacter radioresistens SK82 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 53 98
o Dechlorosoma suillum PS Dsui_2239 tRNA (uracil-5-)-methyltransferase insig. 54 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 50 98
o Klebsiella michiganensis M5al BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 51 98
o Pectobacterium carotovorum WPP14 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 51 98
o Pantoea sp. MT58 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 50 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) cofit 50 98
o Dickeya dadantii 3937 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 50 98
o Rahnella sp. WP5 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 50 98
o Escherichia coli ECRC101 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Escherichia coli ECRC102 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Escherichia coli ECRC98 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA no data 49 98
o Escherichia coli ECRC99 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA no data 49 98
o Escherichia fergusonii Becca EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 49 98
o Escherichia coli Nissle 1917 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Escherichia coli BL21 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase cofit 49 98
o Escherichia coli ECOR27 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 49 98
o Escherichia coli ECRC62 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 49 98
o Escherichia coli BW25113 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) sig. 49 98
o Dickeya dianthicola 67-19 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 50 98
o Escherichia coli ECOR38 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 49 98
o Enterobacter sp. TBS_079 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 48 98
o Escherichia coli ECRC101 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Dickeya dianthicola ME23 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Serratia liquefaciens MT49 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 49 98
o Enterobacter asburiae PDN3 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase insig. 48 98
o Alteromonas macleodii MIT1002 MIT1002_03370 tRNA (uracil(54)-C(5))-methyltransferase insig. 49 98
o Erwinia tracheiphila SCR3 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 48 98
o Shewanella loihica PV-4 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 48 99
o Shewanella sp. ANA-3 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 48 99
o Shewanella oneidensis MR-1 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) sig. 48 99
o Shewanella amazonensis SB2B Sama_0193 tRNA (uracil-5-)-methyltransferase (RefSeq) sig. 48 99
  Escherichia coli BL21 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent insig. 32 80
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli BW25113 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) insig. 32 80
  Escherichia coli ECOR38 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 32 80
  Escherichia coli Nissle 1917 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia fergusonii Becca EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli ECRC62 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli ECRC101 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli ECRC101 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli ECRC102 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 80
  Escherichia coli ECRC98 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no data 32 80
  Escherichia coli ECRC99 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no data 32 80
  Erwinia tracheiphila SCR3 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 34 53
  Dickeya dadantii 3937 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 29 91
  Kangiella aquimarina DSM 16071 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA insig. 35 50
  Escherichia coli ECOR27 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 32 80
  Pseudomonas simiae WCS417 PS417_20155 23S rRNA methyltransferase insig. 29 83
  Serratia liquefaciens MT49 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 29 96
  Marinobacter adhaerens HP15 HP15_790 23S rRNA 5-methyluridine methyltransferase insig. 28 97
  Pseudomonas sp. RS175 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 32 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 30 80
  Pseudomonas fluorescens SBW25 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 28 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 28 81
  Pectobacterium carotovorum WPP14 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 29 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 28 89
  Lysobacter sp. OAE881 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 35 50
  Pseudomonas fluorescens FW300-N2C3 AO356_19055 23S rRNA methyltransferase insig. 32 54
  Dickeya dianthicola ME23 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 28 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 strong 32 54
  Klebsiella michiganensis M5al BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase sig. 38 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 strong 28 81
  Rhodanobacter sp. FW510-T8 OKGIIK_07840 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 50
  Cupriavidus basilensis FW507-4G11 RR42_RS13170 23S rRNA methyltransferase insig. 32 65
  Ralstonia sp. UNC404CL21Col ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 62
  Enterobacter asburiae PDN3 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA insig. 29 79
  Pantoea sp. MT58 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 34 50
  Rhizobium sp. OAE497 ABIE40_RS03880 class I SAM-dependent RNA methyltransferase insig. 30 81
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 33 50
  Ralstonia solanacearum UW163 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 33 50
  Pseudomonas syringae pv. syringae B728a Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 33 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 33 50
  Rhodanobacter denitrificans MT42 LRK55_RS16715 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 34 50
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17000 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 34 50
  Dickeya dianthicola 67-19 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 27 91
  Ralstonia solanacearum PSI07 RPSI07_RS18130 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 31 53
  Enterobacter sp. TBS_079 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 28 90
  Synechococcus elongatus PCC 7942 Synpcc7942_0241 rumA 23S rRNA (uracil-5-)-methyltransferase RumA cofit 28 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 26 98
  Ralstonia solanacearum GMI1000 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 33 50
  Pseudomonas sp. S08-1 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA cofit 27 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 34 50
  Rahnella sp. WP5 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 26 90
  Shewanella amazonensis SB2B Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) sig. 33 56