Homologs of GFF4516 from Sphingobium sp. HT1-2

putative integrase/recombinase

98 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4516 putative integrase/recombinase cofit 100 100
o Azospirillum sp. SherDot2 MPMX19_02698 hypothetical protein insig. 33 92
  Rhizobium sp. OAE497 ABIE40_RS28895 site-specific integrase insig. 33 85
  Dinoroseobacter shibae DFL-12 Dshi_4027 integrase family protein (RefSeq) insig. 32 82
  Shewanella sp. ANA-3 Shewana3_1996 phage integrase family protein (RefSeq) insig. 28 77
  Dinoroseobacter shibae DFL-12 Dshi_3751 integrase family protein (RefSeq) insig. 34 82
o Shewanella oneidensis MR-1 SO2384 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 25 93
  Shewanella sp. ANA-3 Shewana3_4316 phage integrase family protein (RefSeq) insig. 29 92
  Shewanella sp. ANA-3 Shewana3_4367 phage integrase family protein (RefSeq) cofit 28 94
o Pseudomonas sp. SVBP6 COO64_RS23770 site-specific integrase insig. 30 81
o Alteromonas macleodii MIT1002 MIT1002_04206 site-specific tyrosine recombinase XerC insig. 29 93
  Alteromonas macleodii MIT1002 MIT1002_02050 site-specific tyrosine recombinase XerD insig. 27 83
o Kangiella aquimarina DSM 16071 B158DRAFT_1637 Site-specific recombinase XerD insig. 26 80
o Pseudomonas putida KT2440 PP_2981 putative cointegrate resolution protein S insig. 28 80
  Pseudomonas putida KT2440 PP_3181 Site-specific recombinase, phage integrase family insig. 30 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5012 Cointegrate resolution protein S no data 29 79
o Pseudomonas aeruginosa PA14 IKLFDK_10920 Cointegrate resolution protein S insig. 27 80
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3489 Cointegrate resolution protein S insig. 26 81
o Pseudomonas fluorescens FW300-N2E3 AO353_25030 recombinase insig. 28 82
  Pseudomonas sp. BP01 JOY50_RS26650 site-specific integrase insig. 29 73
  Pseudomonas sp. DMC3 GFF2942 Tyrosine recombinase XerC insig. 28 78
  Pseudomonas fluorescens SBW25 PFLU_RS14565 site-specific integrase insig. 28 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14565 site-specific integrase insig. 28 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2926 Cointegrate resolution protein S insig. 28 79
  Pseudomonas simiae WCS417 PS417_14050 recombinase insig. 28 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02929 Tyrosine recombinase XerC cofit 28 78
o Pseudomonas syringae pv. syringae B728a Psyr_2976 Phage integrase:Phage integrase, N-terminal SAM-like protein sig. 26 80
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2976 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 80
  Agrobacterium fabrum C58 Atu5015 phage-related integrase insig. 32 74
  Pseudomonas orientalis W4I3 QF045_RS15910 site-specific integrase insig. 28 78
  Sinorhizobium meliloti 1021 SMa2257 integrase-like protein insig. 30 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03035 Tyrosine recombinase XerC insig. 29 83
  Dechlorosoma suillum PS Dsui_2648 site-specific recombinase XerD cofit 27 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF315 cointegrate resolution protein S insig. 24 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5459 possible integrase-like protein insig. 26 95
  Alteromonas macleodii MIT1002 MIT1002_02111 Site-specific recombinase XerD insig. 25 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00200 site-specific integrase insig. 30 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3486 Mobile element protein insig. 28 55
  Cupriavidus basilensis FW507-4G11 RR42_RS29335 integrase insig. 31 72
  Shewanella sp. ANA-3 Shewana3_4377 phage integrase family protein (RefSeq) insig. 24 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS10365 site-specific integrase insig. 27 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17785 tyrosine-type recombinase/integrase insig. 29 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10415 tyrosine-type recombinase/integrase no data 29 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10785 tyrosine-type recombinase/integrase no data 29 81
o Rhodanobacter denitrificans MT42 LRK55_RS19040 site-specific integrase cofit 27 95
o Rhodanobacter sp. FW510-T8 OKGIIK_06325 xerD integrase insig. 27 95
  Alteromonas macleodii MIT1002 MIT1002_02119 site-specific tyrosine recombinase XerC insig. 26 76
  Pseudomonas syringae pv. syringae B728a Psyr_1475 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1475 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Azospirillum sp. SherDot2 MPMX19_02711 Tyrosine recombinase XerC insig. 33 53
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS18725 tyrosine-type recombinase/integrase insig. 27 86
  Azospirillum sp. SherDot2 MPMX19_06455 Tyrosine recombinase XerC insig. 28 83
  Pseudomonas syringae pv. syringae B728a Psyr_1492 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1492 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12390 recombinase Cre insig. 25 95
  Alteromonas macleodii MIT1002 MIT1002_04179 site-specific tyrosine recombinase XerC insig. 21 79
  Enterobacter sp. TBS_079 MPMX20_04667 Tyrosine recombinase XerC sig. 27 50
  Pseudomonas syringae pv. syringae B728a Psyr_1508 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 27 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1508 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 27 88
  Sphingobium sp. HT1-2 GFF5059 Integrase-like protein cofit 27 60
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 25 85
  Pantoea sp. MT58 IAI47_21540 tyrosine-type recombinase/integrase insig. 24 83
  Pseudomonas syringae pv. syringae B728a Psyr_4646 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4646 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 26 93
  Rhodanobacter denitrificans MT42 LRK55_RS19170 tyrosine-type recombinase/integrase insig. 24 77
  Sphingobium sp. HT1-2 GFF4691 Integrase-like protein cofit 30 56
  Pseudomonas sp. BP01 JOY50_RS12480 tyrosine-type recombinase/integrase no data 25 32
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD strong 21 92
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 22 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 28 71
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20460 recombinase Cre cofit 26 86
  Cellulophaga baltica 18 M666_RS09150 tyrosine-type recombinase/integrase sig. 28 51
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 27 52
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02315 tyrosine recombinase XerC insig. 25 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22125 site-specific integrase cofit 27 51
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 25 92
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 25 86
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 28 59
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 28 57
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 27 52
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 26 89
  Pseudomonas sp. SVBP6 COO64_RS04910 xerD site-specific tyrosine recombinase XerD sig. 25 91
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 25 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 25 86
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 25 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 26 88
  Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 24 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 24 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 24 86
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD sig. 28 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 27 53
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 25 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 23 52
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3231 Site-specific recombinase, phage integrase family insig. 23 79
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 28 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 28 71
  Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC insig. 26 88
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 27 89