Homologs of GFF4390 from Pseudomonas sp. DMC3

hypothetical protein
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

72 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 86 99
o Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 56 96
o Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 55 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 55 96
o Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 52 96
o Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 47 93
o Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 48 89
o Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 44 83
  Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 43 77
o Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 41 81
  Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 42 76
o Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 37 87
  Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 39 77
o Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 37 87
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 36 79
o Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 35 93
o Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 35 93
o Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 35 90
  Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 38 77
  Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 40 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 37 73
  Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 40 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 40 80
  Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 39 80
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 37 78
  Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 35 77
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 34 79
  Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 33 80
  Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 40 74
  Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 36 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 36 72
  Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 33 79
  Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 31 88
o Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 30 87
  Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 34 72
o Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 31 86
o Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 31 94
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 36 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 33 74
o Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 28 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 33 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 38 72
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 33 85
o Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 32 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 34 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 31 78
o Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 31 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 34 80
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 33 80
o Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 34 75
  Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 33 75
  Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 38 76
  Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 32 71
  Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 30 77
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 32 71
o Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 32 71
  Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 32 80
  Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 34 77
o Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 27 98
  Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 28 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 32 79
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 36 69
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 36 69
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 28 96
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 33 68
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 29 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 29 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 31 80
  Pseudomonas fluorescens SBW25 PFLU_RS13590 RidA family protein insig. 30 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13590 RidA family protein insig. 30 79
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 31 67