| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas stutzeri RCH2 | Psest_0404 | | phytoene desaturase | insig. | 100 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14250 | | phytoene desaturase | cofit | 75 | 98 |
| o | Pantoea sp. MT58 | IAI47_20665 | | phytoene desaturase | insig. | 75 | 98 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04375 | | phytoene desaturase | insig. | 72 | 97 |
| o | Xanthobacter sp. DMC5 | GFF434 | | Phytoene desaturase (lycopene-forming) | insig. | 69 | 98 |
| o | Sphingobium sp. HT1-2 | GFF788 | | Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) | cofit | 61 | 98 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2417 | | phytoene desaturase | strong | 63 | 97 |
| o | Rhodopseudomonas palustris CGA009 | TX73_007770 | | phytoene desaturase | no data | 50 | 98 |
| o | Bosea sp. OAE506 | ABIE41_RS09845 | | phytoene desaturase | insig. | 51 | 95 |
| o | Rhodospirillum rubrum S1H | Rru_A0493 | | Phytoene desaturase (NCBI) | strong | 51 | 95 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3508 | | Zeta-phytoene desaturase (RefSeq) | sig. | 42 | 97 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS10345 | | phytoene desaturase | sig. | 36 | 98 |
| o | Azospirillum sp. SherDot2 | MPMX19_05312 | | 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) | insig. | 33 | 95 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10910 | | phytoene dehydrogenase | sig. | 29 | 98 |
| o | Cellulophaga baltica 18 | M666_RS09515 | | phytoene desaturase family protein | cofit | 29 | 97 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19065 | | 1-hydroxycarotenoid 3,4-desaturase CrtD | insig. | 29 | 96 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16545 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 29 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_05311 | | 4,4'-diapolycopene oxygenase | insig. | 31 | 93 |
| | Azospirillum brasilense Sp245 | AZOBR_RS10340 | | phytoene desaturase | insig. | 32 | 98 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1477 | | phytoene desaturase | insig. | 29 | 98 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24235 | | phytoene dehydrogenase | insig. | 30 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS25315 | | phytoene dehydrogenase | insig. | 25 | 92 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_17000 | | phytoene dehydrogenase | insig. | 27 | 94 |
| | Rhodopseudomonas palustris CGA009 | TX73_007805 | | phytoene desaturase family protein | sig. | 29 | 94 |
| | Bosea sp. OAE506 | ABIE41_RS09870 | | 1-hydroxycarotenoid 3,4-desaturase CrtD | insig. | 27 | 99 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3513 | | Zeta-phytoene desaturase (RefSeq) | sig. | 31 | 98 |
| | Rhodospirillum rubrum S1H | Rru_A2984 | | CrtD protein (NCBI) | sig. | 26 | 95 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS15345 | | FAD-dependent oxidoreductase | strong | 25 | 95 |
| o | Synechococcus elongatus PCC 7942 | Synpcc7942_1246 | crtiso | carotene isomerase | strong | 26 | 98 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c25320 | | Phytoene dehydrogenase and related proteins | insig. | 25 | 94 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0538 | | Phytoene dehydrogenase and related proteins | insig. | 27 | 98 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS16540 | | carotene isomerase | strong | 24 | 98 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1824 | | Phytoene dehydrogenase and related proteins | insig. | 25 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS09225 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 27 | 96 |
| o | Marinobacter adhaerens HP15 | HP15_17 | | FAD-dependent oxidoreductase | sig. | 23 | 97 |
| | Sphingobium sp. HT1-2 | GFF1871 | | Beta-carotene ketolase | cofit | 24 | 64 |
| | Azospirillum brasilense Sp245 | AZOBR_RS06660 | | phytoene dehydrogenase | insig. | 27 | 74 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1723 | | carotene isomerase | insig. | 25 | 91 |
| | Caulobacter crescentus NA1000 | CCNA_03221 | | phytoene dehydrogenase | insig. | 26 | 64 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03221 | | phytoene dehydrogenase | cofit | 26 | 64 |
| | Marinobacter adhaerens HP15 | HP15_4014 | | FAD dependent oxidoreductase | insig. | 24 | 96 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3425 | | Beta-carotene ketolase (EC 1.14.-.-) | insig. | 23 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS09250 | | NAD(P)/FAD-dependent oxidoreductase | sig. | 25 | 94 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_24455 | | FAD-dependent oxidoreductase | insig. | 23 | 98 |
| | Rhodopseudomonas palustris CGA009 | TX73_002085 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 25 | 96 |
| | Rhodopseudomonas palustris CGA009 | TX73_018200 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 24 | 63 |
| o | Variovorax sp. OAS795 | ABID97_RS27040 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 23 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2727 | | Beta-carotene ketolase (EC 1.14.-.-) | insig. | 23 | 89 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03235 | | C-3',4' desaturase CrtD | cofit | 23 | 97 |
| | Mycobacterium tuberculosis H37Rv | Rv3829c | | Probable dehydrogenase | insig. | 24 | 96 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08405 | | NAD(P)/FAD-dependent oxidoreductase | strong | 24 | 96 |
| | Dechlorosoma suillum PS | Dsui_2191 | | squalene-associated FAD-dependent desaturase | insig. | 40 | 11 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0970 | crtD | phytoene dehydrogenase-like | sig. | 23 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03862 | | L-amino acid oxidase | insig. | 36 | 12 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13390 | | protoporphyrinogen oxidase | insig. | 32 | 19 |
| | Variovorax sp. OAS795 | ABID97_RS18590 | | NAD(P)/FAD-dependent oxidoreductase | insig. | 43 | 13 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05890 | | amine oxidase | insig. | 41 | 11 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1856 | | phytoene dehydrogenase family protein | insig. | 39 | 14 |
| | Pseudomonas orientalis W4I3 | QF045_RS19415 | | FAD-dependent oxidoreductase | cofit | 36 | 12 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2888 | | Amine oxidase | insig. | 34 | 12 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2888 | | Amine oxidase | insig. | 34 | 12 |
| | Pseudomonas sp. S08-1 | OH686_09755 | | Carotenoid cis-trans isomerase | insig. | 22 | 95 |
| | Mycobacterium tuberculosis H37Rv | Rv3049c | | Probable monooxygenase | insig. | 37 | 16 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06425 | | amine oxidase N | insig. | 38 | 11 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19865 | | FAD-dependent oxidoreductase | insig. | 34 | 12 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19865 | | FAD-dependent oxidoreductase | sig. | 34 | 12 |
| | Pseudomonas sp. BP01 | JOY50_RS04535 | | FAD-dependent oxidoreductase | insig. | 37 | 11 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21495 | | FAD-dependent oxidoreductase | no data | 39 | 11 |