Homologs of GFF3621 from Xanthobacter sp. DMC5

Tyrosine recombinase XerC
SEED: Integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3621 Tyrosine recombinase XerC insig. 100 100
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11865 tyrosine-type recombinase/integrase insig. 39 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2604 Site-specific recombinase XerD insig. 37 99
  Xanthobacter sp. DMC5 GFF2699 Tyrosine recombinase XerC insig. 36 95
  Xanthobacter sp. DMC5 GFF4819 Tyrosine recombinase XerC insig. 32 99
o Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 33 96
  Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 33 91
  Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 33 96
  Xanthobacter sp. DMC5 GFF2731 hypothetical protein insig. 37 71
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 32 93
o Shewanella sp. ANA-3 Shewana3_1244 phage integrase family protein (RefSeq) insig. 27 94
  Dickeya dianthicola 67-19 HGI48_RS04125 tyrosine-type recombinase/integrase insig. 27 94
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 29 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4150 Integrase insig. 27 94
  Variovorax sp. SCN45 GFF7326 Integrase insig. 27 94
  Ralstonia solanacearum GMI1000 RS_RS13140 DUF4102 domain-containing protein insig. 27 96
o Shewanella oneidensis MR-1 SOA0044 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 29 95
  Castellaniella sp019104865 MT123 ABCV34_RS15835 site-specific integrase insig. 27 94
  Variovorax sp. SCN45 GFF4896 Integrase insig. 28 93
o Pseudomonas aeruginosa PA14 IKLFDK_12665 integrase sig. 27 97
  Magnetospirillum magneticum AMB-1 AMB_RS20435 DUF4102 domain-containing protein insig. 26 90
  Magnetospirillum magneticum AMB-1 AMB_RS24300 DUF4102 domain-containing protein cofit 25 91
o Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 30 83
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 32 52
  Pseudomonas stutzeri RCH2 Psest_1102 Integrase insig. 28 85
  Acinetobacter radioresistens SK82 MPMX26_01846 hypothetical protein no data 26 97
  Escherichia coli BW25113 b2442 intZ CPZ-55 prophage; predicted integrase (RefSeq) insig. 26 85
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 28 69
  Desulfovibrio vulgaris Hildenborough JW710 DVU2197 site-specific recombinase, phage integrase family (TIGR) insig. 26 62
  Erwinia amylovora T8 OLJFJH_17590 integrase insig. 24 90
  Pseudomonas fluorescens SBW25 PFLU_RS25960 DUF4102 domain-containing protein insig. 25 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25960 DUF4102 domain-containing protein insig. 25 91
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 26 84
  Dickeya dadantii 3937 DDA3937_RS16520 tyrosine-type recombinase/integrase insig. 23 90
  Rhodanobacter denitrificans MT42 LRK55_RS09060 site-specific integrase insig. 27 65
  Paraburkholderia graminis OAS925 ABIE53_001680 integrase insig. 24 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU1527 site-specific recombinase, phage integrase family (TIGR) insig. 28 74
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 23 75
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 26 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 26 66
o Erwinia tracheiphila SCR3 LU632_RS06490 site-specific integrase insig. 24 90
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 25 90
  Escherichia fergusonii Becca EFB2_00121 Prophage integrase IntS insig. 25 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17510 integrase cofit 24 90
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01970 integrase arm-type DNA-binding domain-containing protein insig. 28 65
  Rahnella sp. WP5 EX31_RS20945 tyrosine-type recombinase/integrase insig. 22 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4152 Phage integrase, Phage P4-associated insig. 23 74
  Escherichia coli ECOR38 HEPCGN_18430 integrase insig. 26 66
  Escherichia coli Nissle 1917 ECOLIN_RS16505 integrase arm-type DNA-binding domain-containing protein insig. 26 66
  Escherichia fergusonii Becca EFB2_00934 Prophage integrase IntS no data 25 66
  Escherichia fergusonii Becca EFB2_04402 Prophage integrase IntS no data 25 66
  Escherichia coli ECOR38 HEPCGN_10690 integrase insig. 25 66
  Escherichia coli ECRC62 BNILDI_09605 integrase insig. 23 96
  Enterobacter sp. TBS_079 MPMX20_00413 Prophage integrase IntS insig. 27 66
  Escherichia coli ECOR38 HEPCGN_14290 fimB integrase insig. 25 88
  Escherichia coli ECRC100 OKFHMN_19165 integrase cofit 25 66
  Escherichia coli ECRC101 MCAODC_09685 integrase insig. 25 66
  Escherichia coli ECRC102 NIAGMN_16930 integrase cofit 25 66
  Escherichia coli ECRC98 JDDGAC_22795 fimB integrase insig. 25 66
  Escherichia coli ECRC99 KEDOAH_08975 integrase no data 25 66
  Escherichia coli BL21 ECD_03516 Int cofit 25 88
  Magnetospirillum magneticum AMB-1 AMB_RS18470 site-specific integrase insig. 27 65
  Dickeya dianthicola 67-19 HGI48_RS05235 tyrosine-type recombinase/integrase insig. 24 84
  Magnetospirillum magneticum AMB-1 AMB_RS02510 DUF4102 domain-containing protein insig. 26 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS43310 tyrosine-type recombinase/integrase insig. 24 60
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 24 75
  Rhodanobacter denitrificans MT42 LRK55_RS00045 site-specific integrase insig. 29 48
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 26 71
  Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 24 85
  Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 26 65
  Klebsiella pneumoniae MKP103 KDGMDA_13990 integrase insig. 25 85
  Pectobacterium carotovorum WPP14 HER17_RS07665 integrase arm-type DNA-binding domain-containing protein cofit 26 71
  Escherichia coli Nissle 1917 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein insig. 25 90
  Cupriavidus basilensis FW507-4G11 RR42_RS19640 hypothetical protein insig. 25 68
  Escherichia fergusonii Becca EFB2_01976 Prophage integrase IntA insig. 26 82
  Escherichia coli Nissle 1917 ECOLIN_RS11220 site-specific integrase insig. 26 82
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 28 47
  Pseudomonas sp. DMC3 GFF370 Tyrosine recombinase XerC cofit 26 47
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2171 Tyrosine recombinase XerC insig. 26 47
  Bacteroides ovatus ATCC 8483 BACOVA_05424 site-specific recombinase, phage integrase family insig. 25 56
  Kangiella aquimarina DSM 16071 B158DRAFT_0218 Site-specific recombinase XerD insig. 25 80
  Erwinia tracheiphila SCR3 LU632_RS03400 integrase family protein insig. 24 96
  Pseudomonas sp. BP01 JOY50_RS11700 xerD site-specific tyrosine recombinase XerD insig. 25 45
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 25 45
  Pseudomonas sp. SVBP6 COO64_RS01270 xerC tyrosine recombinase XerC sig. 26 47
  Pseudomonas sp. S08-1 OH686_21775 Phage integrase insig. 27 68
  Escherichia coli ECRC100 OKFHMN_15505 fimB integrase cofit 25 90
  Escherichia coli ECRC101 MCAODC_06015 fimB integrase insig. 25 90
  Escherichia coli ECRC102 NIAGMN_13265 fimB integrase insig. 25 90
  Escherichia coli ECRC98 JDDGAC_19130 fimB integrase insig. 25 90
  Escherichia coli ECRC99 KEDOAH_12640 fimB integrase no data 25 90
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 22 81
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 30 47
  Dickeya dianthicola ME23 DZA65_RS12035 site-specific tyrosine recombinase XerC no data 26 50
  Dickeya dianthicola ME23 DZA65_RS12070 site-specific tyrosine recombinase XerC no data 26 50
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 24 83
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 26 46
  Castellaniella sp019104865 MT123 ABCV34_RS03400 integrase arm-type DNA-binding domain-containing protein insig. 25 94
  Erwinia tracheiphila SCR3 LU632_RS22055 integrase arm-type DNA-binding domain-containing protein insig. 25 68
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 26 46