Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Marinobacter adhaerens HP15 | HP15_3166 | | two component transcriptional regulator, LuxR family | insig. | 100 | 100 |
o | Pseudomonas putida KT2440 | PP_2672 | | Transcriptional activator protein ExaE | strong | 56 | 95 |
o | Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 56 | 96 |
o | Pseudomonas simiae WCS417 | PS417_17470 | | LuxR family transcriptional regulator | insig. | 56 | 95 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 55 | 95 |
o | Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 54 | 95 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 54 | 95 |
o | Alteromonas macleodii MIT1002 | MIT1002_01198 | | Transcriptional activator protein ExaE | insig. | 37 | 95 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 36 | 95 |
| Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 94 |
| Alteromonas macleodii MIT1002 | MIT1002_02154 | | Response regulator UvrY | strong | 34 | 95 |
o | Paraburkholderia graminis OAS925 | ABIE53_005478 | | two-component system invasion response regulator UvrY | sig. | 37 | 99 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | strong | 35 | 94 |
| Enterobacter sp. TBS_079 | MPMX20_02839 | | Response regulator UvrY | strong | 35 | 94 |
| Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 94 |
| Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 35 | 94 |
| Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 94 |
| Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 35 | 94 |
| Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 35 | 94 |
| Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 35 | 94 |
| Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 94 |
| Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 94 |
| Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 94 |
| Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 94 |
| Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 94 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 35 | 94 |
| Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 94 |
| Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 95 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01334 | | two component transcriptional regulator, LuxR family | no data | 37 | 99 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 34 | 94 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 32 | 97 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 95 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 35 | 95 |
| Pseudomonas stutzeri RCH2 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 33 | 95 |
| Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 95 |
| Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 95 |
| Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 95 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 32 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS10030 | | response regulator transcription factor | cofit | 35 | 95 |
o | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 35 | 95 |
| Erwinia tracheiphila SCR3 | LU632_RS03195 | | response regulator transcription factor | strong | 34 | 95 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 32 | 97 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 32 | 97 |
o | Azospirillum brasilense Sp245 | AZOBR_RS27860 | | regulator | strong | 38 | 94 |
| Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 33 | 95 |
| Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 32 | 97 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32670 | | response regulator transcription factor | insig. | 37 | 94 |
| Alteromonas macleodii MIT1002 | MIT1002_03322 | | Transcriptional activator protein ExaE | strong | 35 | 100 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | strong | 32 | 98 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 35 | 95 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 35 | 95 |
o | Azospirillum sp. SherDot2 | MPMX19_03688 | | Response regulator UvrY | insig. | 36 | 94 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 33 | 95 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 33 | 95 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4814 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 35 | 95 |
| Pseudomonas fluorescens SBW25 | PFLU_RS27420 | | response regulator transcription factor | insig. | 35 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS27420 | | response regulator transcription factor | insig. | 35 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_07270 | | transcriptional regulator | insig. | 35 | 95 |
| Pseudomonas simiae WCS417 | PS417_25765 | | transcriptional regulator | insig. | 35 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_14380 | | transcriptional regulator | insig. | 35 | 95 |
| Pseudomonas simiae WCS417 | PS417_10720 | | chemotaxis protein CheY | strong | 33 | 95 |
| Dickeya dadantii 3937 | DDA3937_RS11645 | | response regulator transcription factor | insig. | 35 | 95 |
| Pseudomonas sp. RS175 | PFR28_04055 | | Response regulator UvrY | strong | 35 | 95 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1209 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 34 | 95 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2537 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 34 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 33 | 95 |
| Pseudomonas putida KT2440 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | strong | 33 | 95 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 32 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 32 | 95 |
| Pseudomonas sp. S08-1 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | strong | 33 | 95 |
| Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 36 | 95 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 35 | 95 |
| Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 31 | 95 |
| Dickeya dianthicola 67-19 | HGI48_RS11705 | | response regulator | insig. | 33 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 31 | 95 |
| Dickeya dianthicola ME23 | DZA65_RS12190 | | response regulator transcription factor | insig. | 33 | 95 |
| Klebsiella michiganensis M5al | BWI76_RS27800 | | DNA-binding response regulator | sig. | 39 | 93 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF304 | | Transcriptional regulatory protein UhpA | insig. | 38 | 93 |
| Acinetobacter radioresistens SK82 | MPMX26_00164 | | Response regulator GacA | strong | 34 | 95 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 32 | 95 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_17605 | | DNA-binding response regulator | insig. | 33 | 96 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 31 | 95 |
| Pseudomonas stutzeri RCH2 | Psest_3659 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 34 | 95 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3952 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 37 | 93 |
| Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 33 | 95 |
| Enterobacter sp. TBS_079 | MPMX20_00033 | | Transcriptional regulatory protein UhpA | sig. | 38 | 93 |
| Dickeya dianthicola 67-19 | HGI48_RS02840 | | transcriptional regulator UhpA | insig. | 37 | 90 |
| Dickeya dianthicola ME23 | DZA65_RS03015 | | transcriptional regulator UhpA | insig. | 37 | 90 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 34 | 95 |
o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 33 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 35 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 35 | 95 |
o | Escherichia coli BL21 | ECD_03553 | | response regulator in two-component regulatory system wtih UhpB | insig. | 38 | 90 |
| Escherichia fergusonii Becca | EFB2_00029 | | Transcriptional regulatory protein UhpA | insig. | 38 | 90 |
| Escherichia coli ECOR27 | NOLOHH_07335 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 38 | 90 |
| Escherichia coli ECOR38 | HEPCGN_13905 | uhpA_G97D | DNA-binding response regulator UhpA | cofit | 38 | 90 |
| Escherichia coli ECRC101 | OKFHMN_15180 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 38 | 90 |
| Escherichia coli ECRC101 | MCAODC_05690 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 38 | 90 |
| Escherichia coli ECRC102 | NIAGMN_12940 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 38 | 90 |
| Escherichia coli ECRC62 | BNILDI_04190 | uhpA_G97D | DNA-binding response regulator UhpA | insig. | 38 | 90 |