Homologs of PS417_14845 from Pseudomonas simiae WCS417

endoribonuclease L-PSP
SEED: RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein

69 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 90 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 90 100
o Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 63 97
o Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 56 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 55 97
o Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 54 90
o Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 46 83
  Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 45 81
  Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 44 81
  Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 43 81
  Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 44 79
  Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 42 81
  Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 42 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 45 74
  Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 42 81
o Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 42 80
o Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 39 81
o Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 38 88
  Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 45 77
  Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 35 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 43 81
  Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 37 89
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 35 84
  Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 40 91
  Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 37 81
  Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 38 81
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 42 76
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 36 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 37 81
  Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 38 92
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 44 74
o Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 38 81
  Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 41 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 34 97
o Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 38 79
  Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 37 80
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 43 74
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 39 81
  Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 37 79
  Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 46 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 46 83
  Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 39 81
  Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 39 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 36 81
  Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 37 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 33 90
  Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 36 97
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 36 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 38 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 38 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 34 97
  Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 34 97
  Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 46 81
  Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 37 81
  Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 35 81
  Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 33 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 38 81
  Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 40 79
  Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 41 74
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 40 74
o Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 32 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 32 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 38 78
  Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 32 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 33 91
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 30 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 32 83